Difference between revisions of "TSS:Hg 100084.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.175 |distance_to_tss=103 |entrez_id=11168 |gc_percent=0.776119 |gene_alias=DFS70|LEDGF|PAIP|PSIP2|p52|p75 |gene_description=PC4 and SFRS1 interactin...") |
|||
| (4 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |LEDGF= | ||
| + | |PAIP= | ||
| + | |PSIP2= | ||
| + | |all_trans=HGNC:9527 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| − | |distance_to_tss= | + | |distance=-25 |
| + | |distance_to_tss=54 | ||
| + | |end=15510921 | ||
| + | |end_of_center_position=15510916 | ||
|entrez_id=11168 | |entrez_id=11168 | ||
|gc_percent=0.776119 | |gc_percent=0.776119 | ||
| − | |gene_alias=DFS70 | + | |gene_alias=DFS70{{!}}LEDGF{{!}}PAIP{{!}}PSIP2{{!}}p52{{!}}p75 |
|gene_description=PC4 and SFRS1 interacting protein 1 | |gene_description=PC4 and SFRS1 interacting protein 1 | ||
| − | |gene_name=PSIP1 | + | |gene_id=11168 |
| + | |gene_name=PC4 and SFRS1 interacting protein 1 | ||
| + | |gene_source=HGNC:9527 | ||
| + | |gene_symbol=PSIP1 | ||
| + | |gene_synonyms=DFS70 LEDGF p52 p75 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:9527 | ||
|nearest_ensembl=ENSG00000164985 | |nearest_ensembl=ENSG00000164985 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_033222 |
|nearest_refseq=NM_021144 | |nearest_refseq=NM_021144 | ||
|nearest_unigene=Hs.658434 | |nearest_unigene=Hs.658434 | ||
| + | |num_trans=11168 | ||
| + | |p52= | ||
| + | |p75= | ||
| + | |species=human | ||
| + | |start=15510910 | ||
| + | |start_of_center_position=15510915 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000463712.6 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100084.1 | |tss_id=hg_100084.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:35, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 15510915 |
|---|---|
| End of the center position in the TSS region: | 15510916 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000463712.6 |
|---|---|
| Distance: | -25 |
| Num_trans: | 11168 |
| All_trans: | HGNC:9527 |
TATA-Box annotation
| Distance to TSS: | 54 |
|---|---|
| Nearest PromoterID: | NM_033222 |
| Entrez ID: | 11168 |
| Nearest Unigene: | Hs.658434 |
| Nearest Refseq: | NM_021144 |
| Nearest Ensembl: | ENSG00000164985 |
| Gene Name: | PC4 and SFRS1 interacting protein 1 |
| Gene Alias: | DFS70|LEDGF|PAIP|PSIP2|p52|p75 |
| Gene Description: | PC4 and SFRS1 interacting protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
