Difference between revisions of "TSS:Hg 100125.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:30988 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance_to_tss= | + | |distance=116 |
| − | |entrez_id= | + | |distance_to_tss=1521 |
| + | |end=16728340 | ||
| + | |end_of_center_position=16728335 | ||
| + | |entrez_id=111216284 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description=basonuclin 2 | + | |gene_description=BNC2 antisense RNA 1 |
| − | | | + | |gene_id=54796 |
| − | |gene_type= | + | |gene_name=basonuclin 2 |
| − | |nearest_ensembl= | + | |gene_source=HGNC:30988 |
| − | |nearest_promoter_id= | + | |gene_symbol=BNC2 |
| − | |nearest_refseq= | + | |gene_synonyms=BSN2 FLJ20043 |
| − | |nearest_unigene=Hs. | + | |gene_type=ncRNA |
| + | |hgnc_mgi_id=HGNC:30988 | ||
| + | |nearest_ensembl=ENSG00000234779 | ||
| + | |nearest_promoter_id=NR_151723 | ||
| + | |nearest_refseq=NR_151723 | ||
| + | |nearest_unigene=Hs.609218 | ||
| + | |num_trans=54796 | ||
| + | |species=human | ||
| + | |start=16728329 | ||
| + | |start_of_center_position=16728334 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000603313.5 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100125.1 | |tss_id=hg_100125.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=S4R351 | ||
}} | }} | ||
Latest revision as of 17:36, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 16728334 |
|---|---|
| End of the center position in the TSS region: | 16728335 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000603313.5 |
|---|---|
| Distance: | 116 |
| Num_trans: | 54796 |
| All_trans: | HGNC:30988 |
TATA-Box annotation
| Distance to TSS: | 1521 |
|---|---|
| Nearest PromoterID: | NR_151723 |
| Entrez ID: | 111216284 |
| Nearest Unigene: | Hs.609218 |
| Nearest Refseq: | NR_151723 |
| Nearest Ensembl: | ENSG00000234779 |
| Gene Name: | basonuclin 2 |
| Gene Alias: | - |
| Gene Description: | BNC2 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
