Difference between revisions of "TSS:Hg 100129.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:30988 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| − | |distance_to_tss=- | + | |distance=247 |
| + | |distance_to_tss=-427 | ||
| + | |end=16871105 | ||
| + | |end_of_center_position=16871098 | ||
|entrez_id=54796 | |entrez_id=54796 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
|gene_alias=BSN2 | |gene_alias=BSN2 | ||
|gene_description=basonuclin 2 | |gene_description=basonuclin 2 | ||
| − | |gene_name=BNC2 | + | |gene_id=54796 |
| + | |gene_name=basonuclin 2 | ||
| + | |gene_source=HGNC:30988 | ||
| + | |gene_symbol=BNC2 | ||
| + | |gene_synonyms=BSN2 FLJ20043 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:30988 | ||
|nearest_ensembl=ENSG00000173068 | |nearest_ensembl=ENSG00000173068 | ||
|nearest_promoter_id=NM_001317940 | |nearest_promoter_id=NM_001317940 | ||
|nearest_refseq=NM_017637 | |nearest_refseq=NM_017637 | ||
|nearest_unigene=Hs.656581 | |nearest_unigene=Hs.656581 | ||
| + | |num_trans=54796 | ||
| + | |species=human | ||
| + | |start=16871089 | ||
| + | |start_of_center_position=16871097 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000486514.5 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100129.1 | |tss_id=hg_100129.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=S4R3R8 | ||
}} | }} | ||
Latest revision as of 17:36, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 16871097 |
|---|---|
| End of the center position in the TSS region: | 16871098 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000486514.5 |
|---|---|
| Distance: | 247 |
| Num_trans: | 54796 |
| All_trans: | HGNC:30988 |
TATA-Box annotation
| Distance to TSS: | -427 |
|---|---|
| Nearest PromoterID: | NM_001317940 |
| Entrez ID: | 54796 |
| Nearest Unigene: | Hs.656581 |
| Nearest Refseq: | NM_017637 |
| Nearest Ensembl: | ENSG00000173068 |
| Gene Name: | basonuclin 2 |
| Gene Alias: | BSN2 |
| Gene Description: | basonuclin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
