Difference between revisions of "TSS:Hg 100203.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:20920 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| − | |distance_to_tss= | + | |distance=-8 |
| + | |distance_to_tss=39 | ||
| + | |end=21031601 | ||
| + | |end_of_center_position=21031601 | ||
|entrez_id=401494 | |entrez_id=401494 | ||
|gc_percent=0.781095 | |gc_percent=0.781095 | ||
|gene_alias=PTPLAD2 | |gene_alias=PTPLAD2 | ||
|gene_description=3-hydroxyacyl-CoA dehydratase 4 | |gene_description=3-hydroxyacyl-CoA dehydratase 4 | ||
| − | |gene_name=HACD4 | + | |gene_id=401494 |
| + | |gene_name=3-hydroxyacyl-CoA dehydratase 4 | ||
| + | |gene_source=HGNC:20920 | ||
| + | |gene_symbol=HACD4 | ||
| + | |gene_synonyms=Em:AL662879.1 OTTHUMG00000021016 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:20920 | ||
|nearest_ensembl=ENSG00000188921 | |nearest_ensembl=ENSG00000188921 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001010915 |
|nearest_refseq=NM_001010915 | |nearest_refseq=NM_001010915 | ||
|nearest_unigene=Hs.716678 | |nearest_unigene=Hs.716678 | ||
| + | |num_trans=401494 | ||
| + | |species=human | ||
| + | |start=21031600 | ||
| + | |start_of_center_position=21031600 | ||
| + | |strand=- | ||
| + | |transcript_name=BC114215 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100203.1 | |tss_id=hg_100203.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:38, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 21031600 |
|---|---|
| End of the center position in the TSS region: | 21031601 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC114215 |
|---|---|
| Distance: | -8 |
| Num_trans: | 401494 |
| All_trans: | HGNC:20920 |
TATA-Box annotation
| Distance to TSS: | 39 |
|---|---|
| Nearest PromoterID: | NM_001010915 |
| Entrez ID: | 401494 |
| Nearest Unigene: | Hs.716678 |
| Nearest Refseq: | NM_001010915 |
| Nearest Ensembl: | ENSG00000188921 |
| Gene Name: | 3-hydroxyacyl-CoA dehydratase 4 |
| Gene Alias: | PTPLAD2 |
| Gene Description: | 3-hydroxyacyl-CoA dehydratase 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
