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Difference between revisions of "TSS:Hg 100211.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC064958:0 AB037775:-13 AL713669:-16 BC039133:-16 ENST00000359039.4:-24 uc003zoy.4:-24 AK091715:-24 AY172949:-33 NM_018847:-74 BX538121:100 BC113513:445 BC105008:445 KJ899219:481
+
|all_trans=HGNC:18732
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.08
 
|cpg_percent=0.08
 
|distance=0
 
|distance=0
|distance_to_tss=84
+
|distance_to_tss=56
 
|end=21335356
 
|end=21335356
 +
|end_of_center_position=21335349
 
|entrez_id=55958
 
|entrez_id=55958
 
|gc_percent=0.676617
 
|gc_percent=0.676617
Line 21: Line 22:
 
|nearest_refseq=NM_018847
 
|nearest_refseq=NM_018847
 
|nearest_unigene=Hs.701778
 
|nearest_unigene=Hs.701778
|num_trans=13
+
|num_trans=55958
 
|species=human
 
|species=human
 
|start=21335340
 
|start=21335340
 +
|start_of_center_position=21335348
 
|strand=-
 
|strand=-
 
|transcript_name=BC064958
 
|transcript_name=BC064958

Latest revision as of 17:38, 19 July 2021

Basic information about the TSS


TSS ID:hg_100211.1
Species:human
Chr:chr9
TSS Classification:yes
Start:21335340
End:21335356
Strand:-
TSS Score:1
Start of the center position in the TSS region:21335348
End of the center position in the TSS region:21335349



Gene and protein annotation


Transcript_name:BC064958
Distance:0
GeneID:55958
HGNC/MGI_ID:HGNC:18732
UniProt_ID:
Gene_name:kelch like family member 9
Gene_symbol:KLHL9
Gene_synonyms:FLJ13568 KIAA1354
Gene_source:HGNC:18732



Transcript annotation


Transcript_name:BC064958
Distance:0
Num_trans:55958
All_trans:HGNC:18732



TATA-Box annotation


Distance to TSS:56
Nearest PromoterID:NM_018847
Entrez ID:55958
Nearest Unigene:Hs.701778
Nearest Refseq:NM_018847
Nearest Ensembl:ENSG00000198642
Gene Name:kelch like family member 9
Gene Alias:-
Gene Description:kelch like family member 9
Gene Type:protein-coding
CpG%:0.08
GC%:0.676617
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):