Difference between revisions of "TSS:Hg 100213.1"
From referenceTSS
| (3 intermediate revisions by the same user not shown) | |||
| Line 3: | Line 3: | ||
|IFNA2B= | |IFNA2B= | ||
|INFA2= | |INFA2= | ||
| − | |all_trans= | + | |all_trans=HGNC:5423 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1 |
|end=21385398 | |end=21385398 | ||
| + | |end_of_center_position=21385397 | ||
|entrez_id=3440 | |entrez_id=3440 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| − | |gene_alias=IFN-alphaA | + | |gene_alias=IFN-alphaA{{!}}IFNA{{!}}IFNA2B{{!}}INFA2 |
|gene_description=interferon alpha 2 | |gene_description=interferon alpha 2 | ||
|gene_id=3440 | |gene_id=3440 | ||
| − | |gene_name= | + | |gene_name=interferon alpha 2 |
|gene_source=HGNC:5423 | |gene_source=HGNC:5423 | ||
|gene_symbol=IFNA2 | |gene_symbol=IFNA2 | ||
| Line 24: | Line 25: | ||
|nearest_refseq=NM_000605 | |nearest_refseq=NM_000605 | ||
|nearest_unigene=Hs.211575 | |nearest_unigene=Hs.211575 | ||
| − | |num_trans= | + | |num_trans=3440 |
|species=human | |species=human | ||
|start=21385395 | |start=21385395 | ||
| + | |start_of_center_position=21385396 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-35(CCCTATTTAAGG,-,0.00) |
| − | |transcript_name= | + | |transcript_name=ENST00000380206.4 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100213.1 | |tss_id=hg_100213.1 | ||
Latest revision as of 17:38, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 21385396 |
|---|---|
| End of the center position in the TSS region: | 21385397 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000380206.4 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3440 |
| All_trans: | HGNC:5423 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_000605 |
| Entrez ID: | 3440 |
| Nearest Unigene: | Hs.211575 |
| Nearest Refseq: | NM_000605 |
| Nearest Ensembl: | ENSG00000188379 |
| Gene Name: | interferon alpha 2 |
| Gene Alias: | IFN-alphaA|IFNA|IFNA2B|INFA2 |
| Gene Description: | interferon alpha 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(CCCTATTTAAGG,-,0.00) |
