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Difference between revisions of "TSS:Hg 100238.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000304425.4:0 ENST00000663833.1:0 ENST00000670459.1:0 NR_027054:13 NR_152879:13 NR_152878:13 NR_152877:13 ENST00000654736.1:-22 AK124391:113
+
|all_trans=HGNC:37187
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.145
 
|cpg_percent=0.145
Line 23: Line 23:
 
|nearest_refseq=NR_027054
 
|nearest_refseq=NR_027054
 
|nearest_unigene=Hs.458096
 
|nearest_unigene=Hs.458096
|num_trans=9
+
|num_trans=554202
 
|species=human
 
|species=human
 
|start=21559810
 
|start=21559810

Latest revision as of 17:38, 19 July 2021

Basic information about the TSS


TSS ID:hg_100238.1
Species:human
Chr:chr9
TSS Classification:yes
Start:21559810
End:21559878
Strand:-
TSS Score:1
Start of the center position in the TSS region:21559844
End of the center position in the TSS region:21559845



Gene and protein annotation


Transcript_name:ENST00000304425.4 ENST00000663833.1 ENST00000670459.1
Distance:0
GeneID:554202
HGNC/MGI_ID:HGNC:37187
UniProt_ID:
Gene_name:MIR31 host gene
Gene_symbol:MIR31HG
Gene_synonyms:LOC554202 LncHIFCAR hsa-lnc-31
Gene_source:HGNC:37187



Transcript annotation


Transcript_name:ENST00000304425.4 ENST00000663833.1 ENST00000670459.1
Distance:0
Num_trans:554202
All_trans:HGNC:37187



TATA-Box annotation


Distance to TSS:-46
Nearest PromoterID:NR_152879
Entrez ID:554202
Nearest Unigene:Hs.458096
Nearest Refseq:NR_027054
Nearest Ensembl:
Gene Name:MIR31 host gene
Gene Alias:LncHIFCAR|hsa-lnc-31
Gene Description:MIR31 host gene
Gene Type:ncRNA
CpG%:0.145
GC%:0.800995
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):