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Difference between revisions of "TSS:Hg 100294.1"

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Line 2: Line 2:
 
|HELN1=
 
|HELN1=
 
|HUB=
 
|HUB=
|all_trans=ENST00000544538.5:0 BC042393:0 NM_001171195:25 NM_001351470:25 NM_001351475:25 NM_001385693:25 NM_001385698:25 NM_001385699:25 NM_001385700:25 NM_001385701:25 BC035004:25 ENST00000223951.10:365 BC030692:365 LQ520546:365
+
|all_trans=HGNC:3313
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.18
 
|cpg_percent=0.18
Line 24: Line 24:
 
|nearest_refseq=NM_004432
 
|nearest_refseq=NM_004432
 
|nearest_unigene=Hs.166109
 
|nearest_unigene=Hs.166109
|num_trans=14
+
|num_trans=1993
 
|species=human
 
|species=human
 
|start=23821844
 
|start=23821844

Latest revision as of 17:40, 19 July 2021

Basic information about the TSS


TSS ID:hg_100294.1
Species:human
Chr:chr9
TSS Classification:yes
Start:23821844
End:23821850
Strand:-
TSS Score:1
Start of the center position in the TSS region:23821847
End of the center position in the TSS region:23821848



Gene and protein annotation


Transcript_name:ENST00000544538.5 BC042393
Distance:0
GeneID:1993
HGNC/MGI_ID:HGNC:3313
UniProt_ID:Q12926
Gene_name:ELAV like RNA binding protein 2
Gene_symbol:ELAVL2
Gene_synonyms:HEL-N1 HuB
Gene_source:HGNC:3313



Transcript annotation


Transcript_name:ENST00000544538.5 BC042393
Distance:0
Num_trans:1993
All_trans:HGNC:3313



TATA-Box annotation


Distance to TSS:-27
Nearest PromoterID:NM_001351470
Entrez ID:1993
Nearest Unigene:Hs.166109
Nearest Refseq:NM_004432
Nearest Ensembl:ENSG00000107105
Gene Name:ELAV like RNA binding protein 2
Gene Alias:HEL-N1|HELN1|HUB
Gene Description:ELAV like RNA binding protein 2
Gene Type:protein-coding
CpG%:0.18
GC%:0.81592
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):