Difference between revisions of "TSS:Hg 100321.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 3: | Line 3: | ||
|CMG-1= | |CMG-1= | ||
|CMG1= | |CMG1= | ||
| − | |all_trans= | + | |NDMSBA= |
| + | |PLA2P= | ||
| + | |PLAP= | ||
| + | |all_trans=HGNC:9043 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 12: | Line 15: | ||
|entrez_id=9373 | |entrez_id=9373 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=DOA1 | + | |gene_alias=DOA1{{!}}NDMSBA{{!}}PLA2P{{!}}PLAP |
|gene_description=phospholipase A2 activating protein | |gene_description=phospholipase A2 activating protein | ||
|gene_id=9373 | |gene_id=9373 | ||
| Line 25: | Line 28: | ||
|nearest_refseq=NM_004253 | |nearest_refseq=NM_004253 | ||
|nearest_unigene=Hs.27182 | |nearest_unigene=Hs.27182 | ||
| − | |num_trans= | + | |num_trans=9373 |
|species=human | |species=human | ||
|start=26947222 | |start=26947222 | ||
|start_of_center_position=26947247 | |start_of_center_position=26947247 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000397292.8 ENST00000520884.5 | + | |transcript_name=ENST00000397292.8 ENST00000520884.5 AF145020 AK002143 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100321.1 | |tss_id=hg_100321.1 | ||
Latest revision as of 17:40, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 26947247 |
|---|---|
| End of the center position in the TSS region: | 26947248 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000397292.8 ENST00000520884.5 AF145020 AK002143 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9373 |
| All_trans: | HGNC:9043 |
TATA-Box annotation
| Distance to TSS: | -5 |
|---|---|
| Nearest PromoterID: | NM_001031689 |
| Entrez ID: | 9373 |
| Nearest Unigene: | Hs.27182 |
| Nearest Refseq: | NM_004253 |
| Nearest Ensembl: | ENSG00000137055 |
| Gene Name: | phospholipase A2 activating protein |
| Gene Alias: | DOA1|NDMSBA|PLA2P|PLAP |
| Gene Description: | phospholipase A2 activating protein |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
