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Difference between revisions of "TSS:Hg 100328.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC126156:0 BC136298:0 AK222987:-7 AK024955:-14 ENST00000380055.5:-35 NM_022901:-35 uc003zqh.4:-35 BC056252:-35
+
|all_trans=HGNC:23379
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.01
 
|cpg_percent=0.01
 
|distance=0
 
|distance=0
|distance_to_tss=43
+
|distance_to_tss=22
 
|end=27005658
 
|end=27005658
 
|end_of_center_position=27005651
 
|end_of_center_position=27005651
Line 22: Line 22:
 
|nearest_refseq=NM_022901
 
|nearest_refseq=NM_022901
 
|nearest_unigene=Hs.128071
 
|nearest_unigene=Hs.128071
|num_trans=8
+
|num_trans=64922
 
|species=human
 
|species=human
 
|start=27005642
 
|start=27005642

Latest revision as of 17:40, 19 July 2021

Basic information about the TSS


TSS ID:hg_100328.1
Species:human
Chr:chr9
TSS Classification:yes
Start:27005642
End:27005658
Strand:-
TSS Score:1
Start of the center position in the TSS region:27005650
End of the center position in the TSS region:27005651



Gene and protein annotation


Transcript_name:BC126156 BC136298
Distance:0
GeneID:64922
HGNC/MGI_ID:HGNC:23379
UniProt_ID:
Gene_name:leucine rich repeat containing 19
Gene_symbol:LRRC19
Gene_synonyms:FLJ21302
Gene_source:HGNC:23379



Transcript annotation


Transcript_name:BC126156 BC136298
Distance:0
Num_trans:64922
All_trans:HGNC:23379



TATA-Box annotation


Distance to TSS:22
Nearest PromoterID:NM_022901
Entrez ID:64922
Nearest Unigene:Hs.128071
Nearest Refseq:NM_022901
Nearest Ensembl:ENSG00000184434
Gene Name:leucine rich repeat containing 19
Gene Alias:-
Gene Description:leucine rich repeat containing 19
Gene Type:protein-coding
CpG%:0.01
GC%:0.288557
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):