Difference between revisions of "TSS:Hg 10036.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |DDR3= | ||
| + | |DR3= | ||
| + | |GEF720= | ||
| + | |LARD= | ||
| + | |PLEKHG5= | ||
| + | |TNFRSF12= | ||
| + | |TR3= | ||
| + | |TRAMP= | ||
| + | |WSL-1= | ||
| + | |WSL-LR= | ||
| + | |all_trans=HGNC:11910 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=16 | ||
|distance_to_tss=69 | |distance_to_tss=69 | ||
| + | |end=6466129 | ||
| + | |end_of_center_position=6466126 | ||
|entrez_id=8718 | |entrez_id=8718 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=APO-3 | + | |gene_alias=APO-3{{!}}DDR3{{!}}DR3{{!}}GEF720{{!}}LARD{{!}}PLEKHG5{{!}}TNFRSF12{{!}}TR3{{!}}TRAMP{{!}}WSL-1{{!}}WSL-LR |
|gene_description=TNF receptor superfamily member 25 | |gene_description=TNF receptor superfamily member 25 | ||
| − | |gene_name=TNFRSF25 | + | |gene_id=8718 |
| + | |gene_name=TNF receptor superfamily member 25 | ||
| + | |gene_source=HGNC:11910 | ||
| + | |gene_symbol=TNFRSF25 | ||
| + | |gene_synonyms=APO-3 DDR3 DR3 LARD TR3 TRAMP WSL-1 WSL-LR | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11910 | ||
|nearest_ensembl=ENSG00000215788 | |nearest_ensembl=ENSG00000215788 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_148967 |
|nearest_refseq=NM_003790 | |nearest_refseq=NM_003790 | ||
|nearest_unigene=Hs.462529 | |nearest_unigene=Hs.462529 | ||
| + | |num_trans=8718 | ||
| + | |species=human | ||
| + | |start=6466122 | ||
| + | |start_of_center_position=6466125 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000348333.7 ENST00000351748.7 ENST00000414040.6 ENST00000502588.5 ENST00000502730.5 ENST00000510563.5 ENST00000461703.6 U72763 U78029 U94501 U94502 U94503 U94504 U94505 U94506 U94507 U94508 U94509 U94510 HQ258574 AB590587 AB308321 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10036.1 | |tss_id=hg_10036.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A5LIN1 Q93038 | ||
}} | }} | ||
Latest revision as of 17:41, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6466125 |
|---|---|
| End of the center position in the TSS region: | 6466126 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000348333.7 ENST00000351748.7 ENST00000414040.6 ENST00000502588.5 ENST00000502730.5 ENST00000510563.5 ENST00000461703.6 U72763 U78029 U94501 U94502 U94503 U94504 U94505 U94506 U94507 U94508 U94509 U94510 HQ258574 AB590587 AB308321 |
|---|---|
| Distance: | 16 |
| Num_trans: | 8718 |
| All_trans: | HGNC:11910 |
TATA-Box annotation
| Distance to TSS: | 69 |
|---|---|
| Nearest PromoterID: | NM_148967 |
| Entrez ID: | 8718 |
| Nearest Unigene: | Hs.462529 |
| Nearest Refseq: | NM_003790 |
| Nearest Ensembl: | ENSG00000215788 |
| Gene Name: | TNF receptor superfamily member 25 |
| Gene Alias: | APO-3|DDR3|DR3|GEF720|LARD|PLEKHG5|TNFRSF12|TR3|TRAMP|WSL-1|WSL-LR |
| Gene Description: | TNF receptor superfamily member 25 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
