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Difference between revisions of "TSS:Hg 100375.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC022036:-67 ENST00000629369.1:-68 uc064smt.1:-68
+
|all_trans=HGNC:49810
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.05
 
|cpg_percent=0.05
Line 6: Line 6:
 
|distance_to_tss=-166485
 
|distance_to_tss=-166485
 
|end=30574944
 
|end=30574944
 +
|end_of_center_position=30574939
 
|entrez_id=401497
 
|entrez_id=401497
 
|gc_percent=0.661692
 
|gc_percent=0.661692
Line 21: Line 22:
 
|nearest_refseq=NR_046204
 
|nearest_refseq=NR_046204
 
|nearest_unigene=Hs.680131
 
|nearest_unigene=Hs.680131
|num_trans=3
+
|num_trans=401497
 
|species=human
 
|species=human
 
|start=30574933
 
|start=30574933
 +
|start_of_center_position=30574938
 
|strand=-
 
|strand=-
 
|transcript_name=BC022036
 
|transcript_name=BC022036

Latest revision as of 17:41, 19 July 2021

Basic information about the TSS


TSS ID:hg_100375.1
Species:human
Chr:chr9
TSS Classification:yes
Start:30574933
End:30574944
Strand:-
TSS Score:1
Start of the center position in the TSS region:30574938
End of the center position in the TSS region:30574939



Gene and protein annotation


Transcript_name:BC022036
Distance:-67
GeneID:401497
HGNC/MGI_ID:HGNC:49810
UniProt_ID:
Gene_name:long intergenic non-protein coding RNA 1242
Gene_symbol:LINC01242
Gene_synonyms:
Gene_source:HGNC:49810



Transcript annotation


Transcript_name:BC022036
Distance:-67
Num_trans:401497
All_trans:HGNC:49810



TATA-Box annotation


Distance to TSS:-166485
Nearest PromoterID:NR_046204
Entrez ID:401497
Nearest Unigene:Hs.680131
Nearest Refseq:NR_046204
Nearest Ensembl:
Gene Name:long intergenic non-protein coding RNA 1242
Gene Alias:-
Gene Description:long intergenic non-protein coding RNA 1242
Gene Type:ncRNA
CpG%:0.05
GC%:0.661692
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):