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Difference between revisions of "TSS:Hg 100382.1"

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Line 4: Line 4:
 
|RLR-1=
 
|RLR-1=
 
|SGMRT2=
 
|SGMRT2=
|all_trans=ENST00000681448.1:14 LF354197:320 MA589774:320
+
|all_trans=HGNC:19102
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 26: Line 26:
 
|nearest_refseq=NM_014314
 
|nearest_refseq=NM_014314
 
|nearest_unigene=Hs.190622
 
|nearest_unigene=Hs.190622
|num_trans=3
+
|num_trans=23586
 
|species=human
 
|species=human
 
|start=32491710
 
|start=32491710

Latest revision as of 17:42, 19 July 2021

Basic information about the TSS


TSS ID:hg_100382.1
Species:human
Chr:chr9
TSS Classification:no
Start:32491710
End:32491714
Strand:-
TSS Score:1
Start of the center position in the TSS region:32491712
End of the center position in the TSS region:32491713



Gene and protein annotation


Transcript_name:ENST00000681448.1
Distance:14
GeneID:23586
HGNC/MGI_ID:HGNC:19102
UniProt_ID:
Gene_name:DExD/H-box helicase 58
Gene_symbol:DDX58
Gene_synonyms:DKFZp434J1111 FLJ13599 RIG-1 RIG-I RIG1
Gene_source:HGNC:19102



Transcript annotation


Transcript_name:ENST00000681448.1
Distance:14
Num_trans:23586
All_trans:HGNC:19102



TATA-Box annotation


Distance to TSS:34484
Nearest PromoterID:NM_014314
Entrez ID:23586
Nearest Unigene:Hs.190622
Nearest Refseq:NM_014314
Nearest Ensembl:ENSG00000107201
Gene Name:DExD/H-box helicase 58
Gene Alias:RIG-I|RIG1|RIGI|RLR-1|SGMRT2
Gene Description:DExD/H-box helicase 58
Gene Type:protein-coding
CpG%:0.015
GC%:0.343284
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):