Difference between revisions of "TSS:Hg 100395.1"
From referenceTSS
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| Line 3: | Line 3: | ||
|RP31= | |RP31= | ||
|TP53BPL= | |TP53BPL= | ||
| − | |all_trans= | + | |all_trans=HGNC:21653 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-18 |
|end=32552629 | |end=32552629 | ||
| + | |end_of_center_position=32552605 | ||
|entrez_id=10210 | |entrez_id=10210 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| − | |gene_alias=LUN | + | |gene_alias=LUN{{!}}P53BP3{{!}}RP31{{!}}TP53BPL |
|gene_description=TOP1 binding arginine/serine rich protein | |gene_description=TOP1 binding arginine/serine rich protein | ||
|gene_id=10210 | |gene_id=10210 | ||
| − | |gene_name= | + | |gene_name=TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase |
|gene_source=HGNC:21653 | |gene_source=HGNC:21653 | ||
|gene_symbol=TOPORS | |gene_symbol=TOPORS | ||
| Line 21: | Line 22: | ||
|hgnc_mgi_id=HGNC:21653 | |hgnc_mgi_id=HGNC:21653 | ||
|nearest_ensembl=ENSG00000197579 | |nearest_ensembl=ENSG00000197579 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_005802 |
|nearest_refseq=NM_005802 | |nearest_refseq=NM_005802 | ||
|nearest_unigene=Hs.589962 | |nearest_unigene=Hs.589962 | ||
| − | |num_trans= | + | |num_trans=10210 |
|species=human | |species=human | ||
|start=32552579 | |start=32552579 | ||
| + | |start_of_center_position=32552604 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000360538.7 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100395.1 | |tss_id=hg_100395.1 | ||
Latest revision as of 17:42, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 32552604 |
|---|---|
| End of the center position in the TSS region: | 32552605 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000360538.7 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10210 |
| All_trans: | HGNC:21653 |
TATA-Box annotation
| Distance to TSS: | -18 |
|---|---|
| Nearest PromoterID: | NM_005802 |
| Entrez ID: | 10210 |
| Nearest Unigene: | Hs.589962 |
| Nearest Refseq: | NM_005802 |
| Nearest Ensembl: | ENSG00000197579 |
| Gene Name: | TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase |
| Gene Alias: | LUN|P53BP3|RP31|TP53BPL |
| Gene Description: | TOP1 binding arginine/serine rich protein |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
