Difference between revisions of "TSS:Hg 100409.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |AOA1= | ||
| + | |AXA1= | ||
| + | |DjA1= | ||
| + | |EAOH= | ||
| + | |EOAHA= | ||
| + | |FHA-HIT= | ||
| + | |HDJ2= | ||
| + | |HSDJ= | ||
| + | |HSJ-2= | ||
| + | |HSJ2= | ||
| + | |HSPF4= | ||
| + | |NEDD7= | ||
| + | |all_trans=HGNC:15984 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| − | |distance_to_tss= | + | |distance=0 |
| − | |entrez_id= | + | |distance_to_tss=2 |
| + | |end=33025147 | ||
| + | |end_of_center_position=33025118 | ||
| + | |entrez_id=54840 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias= | + | |gene_alias=AOA{{!}}AOA1{{!}}AXA1{{!}}EAOH{{!}}EOAHA{{!}}FHA-HIT |
| − | | | + | |gene_description=aprataxin |
| − | | | + | |gene_id=54840 |
| + | |gene_name=aprataxin | ||
| + | |gene_source=HGNC:15984 | ||
| + | |gene_symbol=APTX | ||
| + | |gene_synonyms=AOA AOA1 EAOH EOAHA FLJ20157 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |nearest_ensembl= | + | |hDJ-2= |
| − | |nearest_promoter_id= | + | |hgnc_mgi_id=HGNC:15984 |
| − | |nearest_refseq= | + | |nearest_ensembl=ENSG00000137074 |
| − | |nearest_unigene=Hs. | + | |nearest_promoter_id=NM_001368999 |
| + | |nearest_refseq=NM_017692 | ||
| + | |nearest_unigene=Hs.20158 | ||
| + | |num_trans=54840 | ||
| + | |species=human | ||
| + | |start=33025088 | ||
| + | |start_of_center_position=33025117 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000436040.7 ENST00000673487.1 ENST00000460940.6 ENST00000495360.6 ENST00000473270.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100409.1 | |tss_id=hg_100409.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A5K1VW80 Q7Z2E3 | ||
}} | }} | ||
Latest revision as of 17:42, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 33025117 |
|---|---|
| End of the center position in the TSS region: | 33025118 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000436040.7 ENST00000673487.1 ENST00000460940.6 ENST00000495360.6 ENST00000473270.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 54840 |
| All_trans: | HGNC:15984 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_001368999 |
| Entrez ID: | 54840 |
| Nearest Unigene: | Hs.20158 |
| Nearest Refseq: | NM_017692 |
| Nearest Ensembl: | ENSG00000137074 |
| Gene Name: | aprataxin |
| Gene Alias: | AOA|AOA1|AXA1|EAOH|EOAHA|FHA-HIT |
| Gene Description: | aprataxin |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
