Difference between revisions of "TSS:Hg 100412.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |DjA1= | ||
| + | |HDJ2= | ||
| + | |HSDJ= | ||
| + | |HSJ-2= | ||
| + | |HSJ2= | ||
| + | |HSPF4= | ||
| + | |NEDD7= | ||
| + | |all_trans=HGNC:18247 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance_to_tss= | + | |distance=199 |
| + | |distance_to_tss=21938 | ||
| + | |end=33047212 | ||
| + | |end_of_center_position=33047211 | ||
|entrez_id=3301 | |entrez_id=3301 | ||
|gc_percent=0.273632 | |gc_percent=0.273632 | ||
| − | |gene_alias=DJ-2 | + | |gene_alias=DJ-2{{!}}DjA1{{!}}HDJ2{{!}}HSDJ{{!}}HSJ-2{{!}}HSJ2{{!}}HSPF4{{!}}NEDD7{{!}}hDJ-2 |
|gene_description=DnaJ heat shock protein family (Hsp40) member A1 | |gene_description=DnaJ heat shock protein family (Hsp40) member A1 | ||
| − | |gene_name= | + | |gene_id=55234 |
| + | |gene_name=SMU1 DNA replication regulator and spliceosomal factor | ||
| + | |gene_source=HGNC:18247 | ||
| + | |gene_symbol=SMU1 | ||
| + | |gene_synonyms=BWD FLJ10805 SMU-1 fSAP57 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hDJ-2= | ||
| + | |hgnc_mgi_id=HGNC:18247 | ||
|nearest_ensembl=ENSG00000086061 | |nearest_ensembl=ENSG00000086061 | ||
|nearest_promoter_id=NM_001539 | |nearest_promoter_id=NM_001539 | ||
|nearest_refseq=NM_001539 | |nearest_refseq=NM_001539 | ||
|nearest_unigene=Hs.445203 | |nearest_unigene=Hs.445203 | ||
| + | |num_trans=55234 | ||
| + | |species=human | ||
| + | |start=33047209 | ||
| + | |start_of_center_position=33047210 | ||
| + | |strand=- | ||
| + | |transcript_name=AK001732 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100412.1 | |tss_id=hg_100412.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:42, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 33047210 |
|---|---|
| End of the center position in the TSS region: | 33047211 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK001732 |
|---|---|
| Distance: | 199 |
| Num_trans: | 55234 |
| All_trans: | HGNC:18247 |
TATA-Box annotation
| Distance to TSS: | 21938 |
|---|---|
| Nearest PromoterID: | NM_001539 |
| Entrez ID: | 3301 |
| Nearest Unigene: | Hs.445203 |
| Nearest Refseq: | NM_001539 |
| Nearest Ensembl: | ENSG00000086061 |
| Gene Name: | SMU1 DNA replication regulator and spliceosomal factor |
| Gene Alias: | DJ-2|DjA1|HDJ2|HSDJ|HSJ-2|HSJ2|HSPF4|NEDD7|hDJ-2 |
| Gene Description: | DnaJ heat shock protein family (Hsp40) member A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.273632 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
