Difference between revisions of "TSS:Hg 100432.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=-31606 |entrez_id=101929639 |gc_percent=0.557214 |gene_alias=- |gene_description=B4GALT1 antisense RNA 1 |gene_name=B4GALT1-AS1...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:924 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance_to_tss= | + | |distance=12 |
| − | |entrez_id= | + | |distance_to_tss=26650 |
| + | |end=33135350 | ||
| + | |end_of_center_position=33135342 | ||
| + | |entrez_id=113219452 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=microRNA 12117 |
| − | | | + | |gene_id=2683 |
| + | |gene_name=beta-1,4-galactosyltransferase 1 | ||
| + | |gene_source=HGNC:924 | ||
| + | |gene_symbol=B4GALT1 | ||
| + | |gene_synonyms=beta4Gal-T1 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |nearest_ensembl= | + | |hgnc_mgi_id=HGNC:924 |
| − | |nearest_promoter_id= | + | |nearest_ensembl= |
| − | |nearest_refseq= | + | |nearest_promoter_id=NR_162131 |
| − | |nearest_unigene= | + | |nearest_refseq=NR_162131 |
| + | |nearest_unigene= | ||
| + | |num_trans=2683 | ||
| + | |species=human | ||
| + | |start=33135333 | ||
| + | |start_of_center_position=33135341 | ||
| + | |strand=- | ||
| + | |transcript_name=BX648438 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100432.1 | |tss_id=hg_100432.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:43, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 33135341 |
|---|---|
| End of the center position in the TSS region: | 33135342 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BX648438 |
|---|---|
| Distance: | 12 |
| Num_trans: | 2683 |
| All_trans: | HGNC:924 |
TATA-Box annotation
| Distance to TSS: | 26650 |
|---|---|
| Nearest PromoterID: | NR_162131 |
| Entrez ID: | 113219452 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_162131 |
| Nearest Ensembl: | |
| Gene Name: | beta-1,4-galactosyltransferase 1 |
| Gene Alias: | - |
| Gene Description: | microRNA 12117 |
| Gene Type: | ncRNA |
| CpG%: | 0.03 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
