Personal tools

Difference between revisions of "TSS:Hg 10045.1"

From referenceTSS

Jump to: navigation, search
 
Line 4: Line 4:
 
|Syx=
 
|Syx=
 
|Tech=
 
|Tech=
|all_trans=ENST00000377725.5:-60 BC015231:-60 ENST00000676362.1:-70 NM_001042664:-70 NM_001265594:-70 ENST00000340850.10:-84
+
|all_trans=HGNC:29105
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.1
 
|cpg_percent=0.1
Line 26: Line 26:
 
|nearest_refseq=NM_020631
 
|nearest_refseq=NM_020631
 
|nearest_unigene=Hs.284232
 
|nearest_unigene=Hs.284232
|num_trans=6
+
|num_trans=57449
 
|species=human
 
|species=human
 
|start=6490499
 
|start=6490499

Latest revision as of 17:43, 19 July 2021

Basic information about the TSS


TSS ID:hg_10045.1
Species:human
Chr:chr1
TSS Classification:yes
Start:6490499
End:6490510
Strand:-
TSS Score:1
Start of the center position in the TSS region:6490504
End of the center position in the TSS region:6490505



Gene and protein annotation


Transcript_name:ENST00000377725.5 BC015231
Distance:-60
GeneID:57449
HGNC/MGI_ID:HGNC:29105
UniProt_ID:O94827
Gene_name:pleckstrin homology and RhoGEF domain containing G5
Gene_symbol:PLEKHG5
Gene_synonyms:GEF720 KIAA0720 Syx Tech
Gene_source:HGNC:29105



Transcript annotation


Transcript_name:ENST00000377725.5 BC015231
Distance:-60
Num_trans:57449
All_trans:HGNC:29105



TATA-Box annotation


Distance to TSS:75
Nearest PromoterID:NM_001042664
Entrez ID:57449
Nearest Unigene:Hs.284232
Nearest Refseq:NM_020631
Nearest Ensembl:ENSG00000171680
Gene Name:pleckstrin homology and RhoGEF domain containing G5
Gene Alias:CMTRIC|DSMA4|GEF720|Syx|Tech
Gene Description:pleckstrin homology and RhoGEF domain containing G5
Gene Type:protein-coding
CpG%:0.1
GC%:0.691542
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):