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Difference between revisions of "TSS:Hg 100489.1"

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Line 3: Line 3:
 
|TCC52=
 
|TCC52=
 
|WDR40A=
 
|WDR40A=
|all_trans=AK292935:30 AK000354:57 BC063823:-72 AB067479:-74 DQ518909:-74 ENST00000361264.8:-154 NM_015397:-154 uc003ztt.3:-154 KJ898559:174 AB384317:178
+
|all_trans=HGNC:19911
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.09
 
|cpg_percent=0.09
 
|distance=30
 
|distance=30
|distance_to_tss=159
+
|distance_to_tss=84
 
|end=34126619
 
|end=34126619
 
|end_of_center_position=34126614
 
|end_of_center_position=34126614
 
|entrez_id=25853
 
|entrez_id=25853
 
|gc_percent=0.631841
 
|gc_percent=0.631841
|gene_alias=CT102
+
|gene_alias=CT102{{!}}KIAA1892{{!}}TCC52{{!}}WDR40A
 
|gene_description=DDB1 and CUL4 associated factor 12
 
|gene_description=DDB1 and CUL4 associated factor 12
 
|gene_id=25853
 
|gene_id=25853
Line 25: Line 25:
 
|nearest_refseq=NM_015397
 
|nearest_refseq=NM_015397
 
|nearest_unigene=Hs.493750
 
|nearest_unigene=Hs.493750
|num_trans=10
+
|num_trans=25853
 
|species=human
 
|species=human
 
|start=34126608
 
|start=34126608

Latest revision as of 17:44, 19 July 2021

Basic information about the TSS


TSS ID:hg_100489.1
Species:human
Chr:chr9
TSS Classification:yes
Start:34126608
End:34126619
Strand:-
TSS Score:1
Start of the center position in the TSS region:34126613
End of the center position in the TSS region:34126614



Gene and protein annotation


Transcript_name:AK292935
Distance:30
GeneID:25853
HGNC/MGI_ID:HGNC:19911
UniProt_ID:
Gene_name:DDB1 and CUL4 associated factor 12
Gene_symbol:DCAF12
Gene_synonyms:CT102 DKFZP434O125 MGC1058 TCC52
Gene_source:HGNC:19911



Transcript annotation


Transcript_name:AK292935
Distance:30
Num_trans:25853
All_trans:HGNC:19911



TATA-Box annotation


Distance to TSS:84
Nearest PromoterID:NM_015397
Entrez ID:25853
Nearest Unigene:Hs.493750
Nearest Refseq:NM_015397
Nearest Ensembl:ENSG00000198876
Gene Name:DDB1 and CUL4 associated factor 12
Gene Alias:CT102|KIAA1892|TCC52|WDR40A
Gene Description:DDB1 and CUL4 associated factor 12
Gene Type:protein-coding
CpG%:0.09
GC%:0.631841
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):