Difference between revisions of "TSS:Hg 10050.1"
From referenceTSS
| (3 intermediate revisions by the same user not shown) | |||
| Line 4: | Line 4: | ||
|Syx= | |Syx= | ||
|Tech= | |Tech= | ||
| − | |all_trans= | + | |all_trans=NM_001265592:0 ENST00000537245.6:118 AK294875:118 AK125550:-154 NM_001042663:-176 AB018263:-176 ENST00000400915.8:-188 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=-129 | |distance_to_tss=-129 | ||
|end=6497236 | |end=6497236 | ||
| + | |end_of_center_position=6497225 | ||
|entrez_id=57449 | |entrez_id=57449 | ||
|gc_percent=0.781095 | |gc_percent=0.781095 | ||
| − | |gene_alias=CMTRIC | + | |gene_alias=CMTRIC{{!}}DSMA4{{!}}GEF720{{!}}Syx{{!}}Tech |
|gene_description=pleckstrin homology and RhoGEF domain containing G5 | |gene_description=pleckstrin homology and RhoGEF domain containing G5 | ||
|gene_id=57449 | |gene_id=57449 | ||
| Line 25: | Line 26: | ||
|nearest_refseq=NM_020631 | |nearest_refseq=NM_020631 | ||
|nearest_unigene=Hs.284232 | |nearest_unigene=Hs.284232 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=6497213 | |start=6497213 | ||
| + | |start_of_center_position=6497224 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NM_001265592.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10050.1 | |tss_id=hg_10050.1 | ||
Latest revision as of 17:44, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6497224 |
|---|---|
| End of the center position in the TSS region: | 6497225 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001265592.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | NM_001265592:0 ENST00000537245.6:118 AK294875:118 AK125550:-154 NM_001042663:-176 AB018263:-176 ENST00000400915.8:-188 |
TATA-Box annotation
| Distance to TSS: | -129 |
|---|---|
| Nearest PromoterID: | NM_001265592 |
| Entrez ID: | 57449 |
| Nearest Unigene: | Hs.284232 |
| Nearest Refseq: | NM_020631 |
| Nearest Ensembl: | ENSG00000171680 |
| Gene Name: | pleckstrin homology and RhoGEF domain containing G5 |
| Gene Alias: | CMTRIC|DSMA4|GEF720|Syx|Tech |
| Gene Description: | pleckstrin homology and RhoGEF domain containing G5 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
