Difference between revisions of "TSS:Hg 100540.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |DSMA2= | ||
| + | |OPRS1= | ||
| + | |SIG-1R= | ||
| + | |SR-BP= | ||
| + | |SR-BP1= | ||
| + | |SRBP= | ||
| + | |all_trans=HGNC:8157 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| + | |distance=0 | ||
|distance_to_tss=5 | |distance_to_tss=5 | ||
| + | |end=34637831 | ||
| + | |end_of_center_position=34637821 | ||
|entrez_id=10280 | |entrez_id=10280 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=ALS16 | + | |gene_alias=ALS16{{!}}DSMA2{{!}}OPRS1{{!}}SIG-1R{{!}}SR-BP{{!}}SR-BP1{{!}}SRBP{{!}}hSigmaR1{{!}}sigma1R |
|gene_description=sigma non-opioid intracellular receptor 1 | |gene_description=sigma non-opioid intracellular receptor 1 | ||
| − | |gene_name=SIGMAR1 | + | |gene_id=10280 |
| + | |gene_name=sigma non-opioid intracellular receptor 1 | ||
| + | |gene_source=HGNC:8157 | ||
| + | |gene_symbol=SIGMAR1 | ||
| + | |gene_synonyms=SR-BP1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hSigmaR1= | ||
| + | |hgnc_mgi_id=HGNC:8157 | ||
|nearest_ensembl=ENSG00000147955 | |nearest_ensembl=ENSG00000147955 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_147157 |
|nearest_refseq=NM_005866 | |nearest_refseq=NM_005866 | ||
|nearest_unigene=Hs.522087 | |nearest_unigene=Hs.522087 | ||
| + | |num_trans=10280 | ||
| + | |sigma1R= | ||
| + | |species=human | ||
| + | |start=34637810 | ||
| + | |start_of_center_position=34637820 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000681409.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100540.1 | |tss_id=hg_100540.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q99720 | ||
}} | }} | ||
Latest revision as of 17:45, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 34637820 |
|---|---|
| End of the center position in the TSS region: | 34637821 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000681409.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10280 |
| All_trans: | HGNC:8157 |
TATA-Box annotation
| Distance to TSS: | 5 |
|---|---|
| Nearest PromoterID: | NM_147157 |
| Entrez ID: | 10280 |
| Nearest Unigene: | Hs.522087 |
| Nearest Refseq: | NM_005866 |
| Nearest Ensembl: | ENSG00000147955 |
| Gene Name: | sigma non-opioid intracellular receptor 1 |
| Gene Alias: | ALS16|DSMA2|OPRS1|SIG-1R|SR-BP|SR-BP1|SRBP|hSigmaR1|sigma1R |
| Gene Description: | sigma non-opioid intracellular receptor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
