Difference between revisions of "TSS:Hg 100551.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |C9orf144A= | ||
|FAM205B= | |FAM205B= | ||
| − | |all_trans= | + | |all_trans=HGNC:24504 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 10: | Line 11: | ||
|entrez_id=389715 | |entrez_id=389715 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
| − | |gene_alias=C9orf144 | + | |gene_alias=C9orf144{{!}}C9orf144A{{!}}FAM205B |
|gene_description=transmembrane protein C9orf144B pseudogene | |gene_description=transmembrane protein C9orf144B pseudogene | ||
|gene_id=389715 | |gene_id=389715 | ||
| − | |gene_name= | + | |gene_name=family with sequence similarity 205 member B, pseudogene |
|gene_source=HGNC:24504 | |gene_source=HGNC:24504 | ||
|gene_symbol=FAM205BP | |gene_symbol=FAM205BP | ||
| Line 23: | Line 24: | ||
|nearest_refseq=NM_001126494 | |nearest_refseq=NM_001126494 | ||
|nearest_unigene=Hs.713965 | |nearest_unigene=Hs.713965 | ||
| − | |num_trans= | + | |num_trans=389715 |
|species=human | |species=human | ||
|start=34838528 | |start=34838528 | ||
| Line 29: | Line 30: | ||
|strand=- | |strand=- | ||
|transcript_name=BX648118 | |transcript_name=BX648118 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_100551.1 | |tss_id=hg_100551.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:45, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 34838533 |
|---|---|
| End of the center position in the TSS region: | 34838534 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BX648118 |
|---|---|
| Distance: | 0 |
| Num_trans: | 389715 |
| All_trans: | HGNC:24504 |
TATA-Box annotation
| Distance to TSS: | 52 |
|---|---|
| Nearest PromoterID: | NR_024481 |
| Entrez ID: | 389715 |
| Nearest Unigene: | Hs.713965 |
| Nearest Refseq: | NM_001126494 |
| Nearest Ensembl: | |
| Gene Name: | family with sequence similarity 205 member B, pseudogene |
| Gene Alias: | C9orf144|C9orf144A|FAM205B |
| Gene Description: | transmembrane protein C9orf144B pseudogene |
| Gene Type: | pseudo |
| CpG%: | 0.01 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
