Difference between revisions of "TSS:Hg 10057.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|NET6= | |NET6= | ||
| − | |all_trans= | + | |all_trans=HGNC:26265 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance=164 | |distance=164 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-259 |
|end=6554782 | |end=6554782 | ||
|end_of_center_position=6554772 | |end_of_center_position=6554772 | ||
|entrez_id=79707 | |entrez_id=79707 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| − | |gene_alias=Grc3 | + | |gene_alias=Grc3{{!}}NET6 |
|gene_description=nucleolar protein 9 | |gene_description=nucleolar protein 9 | ||
|gene_id=79707 | |gene_id=79707 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_024654 | |nearest_refseq=NM_024654 | ||
|nearest_unigene=Hs.59425 | |nearest_unigene=Hs.59425 | ||
| − | |num_trans= | + | |num_trans=79707 |
|species=human | |species=human | ||
|start=6554761 | |start=6554761 | ||
|start_of_center_position=6554771 | |start_of_center_position=6554771 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC105095 BC112278 BC143646 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10057.1 | |tss_id=hg_10057.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 17:46, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6554771 |
|---|---|
| End of the center position in the TSS region: | 6554772 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC105095 BC112278 BC143646 |
|---|---|
| Distance: | 164 |
| Num_trans: | 79707 |
| All_trans: | HGNC:26265 |
TATA-Box annotation
| Distance to TSS: | -259 |
|---|---|
| Nearest PromoterID: | NM_024654 |
| Entrez ID: | 79707 |
| Nearest Unigene: | Hs.59425 |
| Nearest Refseq: | NM_024654 |
| Nearest Ensembl: | ENSG00000162408 |
| Gene Name: | nucleolar protein 9 |
| Gene Alias: | Grc3|NET6 |
| Gene Description: | nucleolar protein 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
