Difference between revisions of "TSS:Hg 100572.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.095 |distance_to_tss=-73 |entrez_id=80256 |gc_percent=0.746269 |gene_alias=KIAA1539 |gene_description=family with sequence similarity 214 member B |...") |
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{{TSSDetail | {{TSSDetail | ||
+ | |all_trans=NM_001317991:0 ENST00000378557.1:14 AL583909:63 ENST00000378561.5:-116 AB040972:-116 LF354330:120 MA589907:120 ENST00000603301.5:-130 LF354329:361 MA589906:361 LF354328:471 MA589905:471 | ||
+ | |chr=chr9 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
− | |distance_to_tss= | + | |distance=0 |
+ | |distance_to_tss=5 | ||
+ | |end=35111458 | ||
+ | |end_of_center_position=35111448 | ||
|entrez_id=80256 | |entrez_id=80256 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
|gene_alias=KIAA1539 | |gene_alias=KIAA1539 | ||
|gene_description=family with sequence similarity 214 member B | |gene_description=family with sequence similarity 214 member B | ||
− | |gene_name=FAM214B | + | |gene_id=80256 |
+ | |gene_name=family with sequence similarity 214 member B | ||
+ | |gene_source=HGNC:25666 | ||
+ | |gene_symbol=FAM214B | ||
+ | |gene_synonyms=FLJ11560 bA182N22.6 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
+ | |hgnc_mgi_id=HGNC:25666 | ||
|nearest_ensembl=ENSG00000005238 | |nearest_ensembl=ENSG00000005238 | ||
|nearest_promoter_id=NM_001317991 | |nearest_promoter_id=NM_001317991 | ||
|nearest_refseq=NM_025182 | |nearest_refseq=NM_025182 | ||
|nearest_unigene=Hs.301696 | |nearest_unigene=Hs.301696 | ||
+ | |num_trans=12 | ||
+ | |species=human | ||
+ | |start=35111436 | ||
+ | |start_of_center_position=35111447 | ||
+ | |strand=- | ||
+ | |transcript_name=NM_001317991.2 | ||
+ | |tss_classification=yes | ||
|tss_id=hg_100572.1 | |tss_id=hg_100572.1 | ||
+ | |tss_score=1 | ||
+ | |uniprot_id=Q7L5A3 | ||
}} | }} |
Latest revision as of 17:46, 19 July 2021
Basic information about the TSS
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Start of the center position in the TSS region: | 35111447 |
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End of the center position in the TSS region: | 35111448 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | NM_001317991.2 |
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Distance: | 0 |
Num_trans: | 12 |
All_trans: | NM_001317991:0 ENST00000378557.1:14 AL583909:63 ENST00000378561.5:-116 AB040972:-116 LF354330:120 MA589907:120 ENST00000603301.5:-130 LF354329:361 MA589906:361 LF354328:471 MA589905:471 |
TATA-Box annotation
Distance to TSS: | 5 |
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Nearest PromoterID: | NM_001317991 |
Entrez ID: | 80256 |
Nearest Unigene: | Hs.301696 |
Nearest Refseq: | NM_025182 |
Nearest Ensembl: | ENSG00000005238 |
Gene Name: | family with sequence similarity 214 member B |
Gene Alias: | KIAA1539 |
Gene Description: | family with sequence similarity 214 member B |
Gene Type: | protein-coding |
CpG%: | 0.095 |
GC%: | 0.746269 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |