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Difference between revisions of "TSS:Hg 100643.1"

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Line 2: Line 2:
 
|LZIP=
 
|LZIP=
 
|TLN=
 
|TLN=
|all_trans=ENST00000378192.2:-124 BC020881:-124 AF177198:-151 AF078828:-169 BC042923:-201 ENST00000314888.10:-215 NM_006289:-215 LF354354:-224 MA589931:-224 BC021005:-381 AB028950:-390 LF354355:-465 MA589932:-465
+
|all_trans=HGNC:11845
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.085
 
|cpg_percent=0.085
Line 24: Line 24:
 
|nearest_refseq=NM_006289
 
|nearest_refseq=NM_006289
 
|nearest_unigene=Hs.471014
 
|nearest_unigene=Hs.471014
|num_trans=13
+
|num_trans=7094
 
|sLZIP=
 
|sLZIP=
 
|species=human
 
|species=human

Latest revision as of 17:48, 19 July 2021

Basic information about the TSS


TSS ID:hg_100643.1
Species:human
Chr:chr9
TSS Classification:yes
Start:35731962
End:35731980
Strand:-
TSS Score:1
Start of the center position in the TSS region:35731971
End of the center position in the TSS region:35731972



Gene and protein annotation


Transcript_name:ENST00000378192.2 BC020881
Distance:-124
GeneID:7094
HGNC/MGI_ID:HGNC:11845
UniProt_ID:
Gene_name:talin 1
Gene_symbol:TLN1
Gene_synonyms:ILWEQ
Gene_source:HGNC:11845



Transcript annotation


Transcript_name:ENST00000378192.2 BC020881
Distance:-124
Num_trans:7094
All_trans:HGNC:11845



TATA-Box annotation


Distance to TSS:224
Nearest PromoterID:NM_006289
Entrez ID:7094
Nearest Unigene:Hs.471014
Nearest Refseq:NM_006289
Nearest Ensembl:ENSG00000137076
Gene Name:talin 1
Gene Alias:ILWEQ|TLN|talin-1
Gene Description:talin 1
Gene Type:protein-coding
CpG%:0.085
GC%:0.696517
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):