Difference between revisions of "TSS:Hg 100664.1"
From referenceTSS
| (3 intermediate revisions by the same user not shown) | |||
| Line 5: | Line 5: | ||
|SMP1= | |SMP1= | ||
|SPAG3= | |SPAG3= | ||
| − | |all_trans= | + | |all_trans=HGNC:14105 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 11: | Line 11: | ||
|distance_to_tss=93 | |distance_to_tss=93 | ||
|end=35812194 | |end=35812194 | ||
| + | |end_of_center_position=35812169 | ||
|entrez_id=26206 | |entrez_id=26206 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=BS-84 | + | |gene_alias=BS-84{{!}}CILD28{{!}}CT142{{!}}HSD-1{{!}}SMP1{{!}}SPAG3{{!}}hSMP-1 |
|gene_description=sperm associated antigen 8 | |gene_description=sperm associated antigen 8 | ||
|gene_id=26206 | |gene_id=26206 | ||
| Line 24: | Line 25: | ||
|hgnc_mgi_id=HGNC:14105 | |hgnc_mgi_id=HGNC:14105 | ||
|nearest_ensembl=ENSG00000137098 | |nearest_ensembl=ENSG00000137098 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_159431 |
|nearest_refseq=NM_012436 | |nearest_refseq=NM_012436 | ||
|nearest_unigene=Hs.256747 | |nearest_unigene=Hs.256747 | ||
| − | |num_trans= | + | |num_trans=26206 |
|species=human | |species=human | ||
|start=35812143 | |start=35812143 | ||
| + | |start_of_center_position=35812168 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000463889.5 ENST00000484764.5 | + | |transcript_name=ENST00000463889.5 ENST00000484764.5 ENST00000497810.1 ENST00000495667.5 ENST00000472605.1 ENST00000471631.1 BC019247 DQ890798 EU176503 AK302313 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100664.1 | |tss_id=hg_100664.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=C9JAA8 F2Z302 F8WBP3 H7C4J6 | + | |uniprot_id=C9JAA8 F2Z302 F8WBP3 H7C4J6 |
}} | }} | ||
Latest revision as of 17:48, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35812168 |
|---|---|
| End of the center position in the TSS region: | 35812169 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000463889.5 ENST00000484764.5 ENST00000497810.1 ENST00000495667.5 ENST00000472605.1 ENST00000471631.1 BC019247 DQ890798 EU176503 AK302313 |
|---|---|
| Distance: | 0 |
| Num_trans: | 26206 |
| All_trans: | HGNC:14105 |
TATA-Box annotation
| Distance to TSS: | 93 |
|---|---|
| Nearest PromoterID: | NR_159431 |
| Entrez ID: | 26206 |
| Nearest Unigene: | Hs.256747 |
| Nearest Refseq: | NM_012436 |
| Nearest Ensembl: | ENSG00000137098 |
| Gene Name: | sperm associated antigen 8 |
| Gene Alias: | BS-84|CILD28|CT142|HSD-1|SMP1|SPAG3|hSMP-1 |
| Gene Description: | sperm associated antigen 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
