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Difference between revisions of "TSS:Hg 100690.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK097653:-42 ENST00000353739.8:247 ENST00000611646.4:247 BC033786:247 ENST00000259605.11:277 NM_022781:277 NM_194329:277 ENST00000377877.4:-292 AK093480:-294 AF394047:-298 AL136817:330 ENST00000357058.7:-343 ENST00000350199.8:-343 NM_194332:-343 NM_194328:-343
+
|all_trans=HGNC:18052
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.14
 
|cpg_percent=0.14
Line 22: Line 22:
 
|nearest_refseq=NM_022781
 
|nearest_refseq=NM_022781
 
|nearest_unigene=Hs.333503
 
|nearest_unigene=Hs.333503
|num_trans=15
+
|num_trans=152006
 
|species=human
 
|species=human
 
|start=36400545
 
|start=36400545

Latest revision as of 17:49, 19 July 2021

Basic information about the TSS


TSS ID:hg_100690.1
Species:human
Chr:chr9
TSS Classification:yes
Start:36400545
End:36400580
Strand:-
TSS Score:1
Start of the center position in the TSS region:36400562
End of the center position in the TSS region:36400563



Gene and protein annotation


Transcript_name:AK097653
Distance:-42
GeneID:152006
HGNC/MGI_ID:HGNC:18052
UniProt_ID:
Gene_name:ring finger protein 38
Gene_symbol:RNF38
Gene_synonyms:
Gene_source:HGNC:18052



Transcript annotation


Transcript_name:AK097653
Distance:-42
Num_trans:152006
All_trans:HGNC:18052



TATA-Box annotation


Distance to TSS:-294
Nearest PromoterID:NM_194329
Entrez ID:152006
Nearest Unigene:Hs.333503
Nearest Refseq:NM_022781
Nearest Ensembl:ENSG00000137075
Gene Name:ring finger protein 38
Gene Alias:-
Gene Description:ring finger protein 38
Gene Type:protein-coding
CpG%:0.14
GC%:0.776119
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):