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Difference between revisions of "TSS:Hg 100691.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK097653:75 ENST00000377877.4:-153 uc003zzl.5:-153 AK093480:-155 AF394047:-159 ENST00000357058.7:-204 ENST00000350199.8:-204 NM_194332:-204 NM_194328:-204 uc003zzk.5:-204 uc003zzj.5:-204 ENST00000353739.8:398 ENST00000611646.4:398 NM_194329:398 NM_022781:398 uc003zzi.5:398 uc064tar.1:398 BC033786:398 ENST00000491349.5:-477 uc064tas.1:-477 ENST00000377885.6:-479 ENST00000484621.1:-479 NM_194330:-479 uc003zzm.5:-479 uc064tat.1:-479 ENST00000259605.10:481 uc003zzh.5:481 AL136817:481
+
|all_trans=HGNC:18052
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.11
 
|cpg_percent=0.11
Line 6: Line 6:
 
|distance_to_tss=215
 
|distance_to_tss=215
 
|end=36400719
 
|end=36400719
 +
|end_of_center_position=36400708
 
|entrez_id=152006
 
|entrez_id=152006
 
|gc_percent=0.691542
 
|gc_percent=0.691542
Line 21: Line 22:
 
|nearest_refseq=NM_022781
 
|nearest_refseq=NM_022781
 
|nearest_unigene=Hs.333503
 
|nearest_unigene=Hs.333503
|num_trans=28
+
|num_trans=152006
 
|species=human
 
|species=human
 
|start=36400696
 
|start=36400696
 +
|start_of_center_position=36400707
 
|strand=-
 
|strand=-
 
|transcript_name=AK097653
 
|transcript_name=AK097653

Latest revision as of 17:49, 19 July 2021

Basic information about the TSS


TSS ID:hg_100691.1
Species:human
Chr:chr9
TSS Classification:yes
Start:36400696
End:36400719
Strand:-
TSS Score:1
Start of the center position in the TSS region:36400707
End of the center position in the TSS region:36400708



Gene and protein annotation


Transcript_name:AK097653
Distance:75
GeneID:152006
HGNC/MGI_ID:HGNC:18052
UniProt_ID:
Gene_name:ring finger protein 38
Gene_symbol:RNF38
Gene_synonyms:
Gene_source:HGNC:18052



Transcript annotation


Transcript_name:AK097653
Distance:75
Num_trans:152006
All_trans:HGNC:18052



TATA-Box annotation


Distance to TSS:215
Nearest PromoterID:NM_194332
Entrez ID:152006
Nearest Unigene:Hs.333503
Nearest Refseq:NM_022781
Nearest Ensembl:ENSG00000137075
Gene Name:ring finger protein 38
Gene Alias:-
Gene Description:ring finger protein 38
Gene Type:protein-coding
CpG%:0.11
GC%:0.691542
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):