Difference between revisions of "TSS:Hg 100697.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000377885.6:48 ENST00000484621.1:48 NM_194330 | + | |all_trans=ENST00000377885.6:48 ENST00000484621.1:48 NM_194330:48 ENST00000491349.5:50 ENST00000357058.7:323 ENST00000350199.8:323 NM_194332:323 NM_194328:323 AF394047:368 AK093480:372 ENST00000377877.4:374 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| − | |distance= | + | |distance=40 |
|distance_to_tss=-59 | |distance_to_tss=-59 | ||
|end=36401269 | |end=36401269 | ||
| + | |end_of_center_position=36401258 | ||
|entrez_id=152006 | |entrez_id=152006 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_022781 | |nearest_refseq=NM_022781 | ||
|nearest_unigene=Hs.333503 | |nearest_unigene=Hs.333503 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=36401245 | |start=36401245 | ||
| + | |start_of_center_position=36401257 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NM_194330.3 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100697.1 | |tss_id=hg_100697.1 | ||
Latest revision as of 17:49, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 36401257 |
|---|---|
| End of the center position in the TSS region: | 36401258 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_194330.3 |
|---|---|
| Distance: | 40 |
| Num_trans: | 11 |
| All_trans: | ENST00000377885.6:48 ENST00000484621.1:48 NM_194330:48 ENST00000491349.5:50 ENST00000357058.7:323 ENST00000350199.8:323 NM_194332:323 NM_194328:323 AF394047:368 AK093480:372 ENST00000377877.4:374 |
TATA-Box annotation
| Distance to TSS: | -59 |
|---|---|
| Nearest PromoterID: | NM_194330 |
| Entrez ID: | 152006 |
| Nearest Unigene: | Hs.333503 |
| Nearest Refseq: | NM_022781 |
| Nearest Ensembl: | ENSG00000137075 |
| Gene Name: | ring finger protein 38 |
| Gene Alias: | - |
| Gene Description: | ring finger protein 38 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
