Difference between revisions of "TSS:Hg 100743.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:23683 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
|distance=5 | |distance=5 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-13650 |
|end=37637310 | |end=37637310 | ||
| + | |end_of_center_position=37637304 | ||
|entrez_id=22844 | |entrez_id=22844 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| Line 11: | Line 12: | ||
|gene_description=FERM and PDZ domain containing 1 | |gene_description=FERM and PDZ domain containing 1 | ||
|gene_id= | |gene_id= | ||
| − | |gene_name= | + | |gene_name=RAB1C, member RAS oncogene family pseudogene |
|gene_source=HGNC:23683 | |gene_source=HGNC:23683 | ||
|gene_symbol=RAB1C | |gene_symbol=RAB1C | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_014907 | |nearest_refseq=NM_014907 | ||
|nearest_unigene=Hs.163990 | |nearest_unigene=Hs.163990 | ||
| − | |num_trans= | + | |num_trans= |
|species=human | |species=human | ||
|start=37637297 | |start=37637297 | ||
| + | |start_of_center_position=37637303 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000409159.2 | |transcript_name=ENST00000409159.2 | ||
Latest revision as of 17:50, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 37637303 |
|---|---|
| End of the center position in the TSS region: | 37637304 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000409159.2 |
|---|---|
| Distance: | 5 |
| Num_trans: | |
| All_trans: | HGNC:23683 |
TATA-Box annotation
| Distance to TSS: | -13650 |
|---|---|
| Nearest PromoterID: | NM_014907 |
| Entrez ID: | 22844 |
| Nearest Unigene: | Hs.163990 |
| Nearest Refseq: | NM_014907 |
| Nearest Ensembl: | ENSG00000070601 |
| Gene Name: | RAB1C, member RAS oncogene family pseudogene |
| Gene Alias: | FRMD2 |
| Gene Description: | FERM and PDZ domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
