Difference between revisions of "TSS:Hg 100778.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:23643 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=19 |
|end=38620620 | |end=38620620 | ||
|end_of_center_position=38620577 | |end_of_center_position=38620577 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:23643 | |hgnc_mgi_id=HGNC:23643 | ||
|nearest_ensembl=ENSG00000180071 | |nearest_ensembl=ENSG00000180071 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001331100 |
|nearest_refseq=NM_147195 | |nearest_refseq=NM_147195 | ||
|nearest_unigene=Hs.644630 | |nearest_unigene=Hs.644630 | ||
| − | |num_trans= | + | |num_trans=253650 |
|species=human | |species=human | ||
|start=38620533 | |start=38620533 | ||
|start_of_center_position=38620576 | |start_of_center_position=38620576 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000399703. | + | |transcript_name=ENST00000399703.6 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100778.1 | |tss_id=hg_100778.1 | ||
Latest revision as of 17:50, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 38620576 |
|---|---|
| End of the center position in the TSS region: | 38620577 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000399703.6 |
|---|---|
| Distance: | 0 |
| Num_trans: | 253650 |
| All_trans: | HGNC:23643 |
TATA-Box annotation
| Distance to TSS: | 19 |
|---|---|
| Nearest PromoterID: | NM_001331100 |
| Entrez ID: | 253650 |
| Nearest Unigene: | Hs.644630 |
| Nearest Refseq: | NM_147195 |
| Nearest Ensembl: | ENSG00000180071 |
| Gene Name: | ankyrin repeat domain 18A |
| Gene Alias: | - |
| Gene Description: | ankyrin repeat domain 18A |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
