Difference between revisions of "TSS:Hg 100795.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:51768 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-11 | |distance_to_tss=-11 | ||
|end=63859661 | |end=63859661 | ||
| + | |end_of_center_position=63859645 | ||
|entrez_id=642236 | |entrez_id=642236 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=FSHD region gene 1 family member J, pseudogene |
|gene_id=642236 | |gene_id=642236 | ||
| − | |gene_name= | + | |gene_name=FSHD region gene 1 family member J, pseudogene |
|gene_source=HGNC:51768 | |gene_source=HGNC:51768 | ||
|gene_symbol=FRG1JP | |gene_symbol=FRG1JP | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_033907 | |nearest_refseq=NR_033907 | ||
|nearest_unigene=Hs.650100 | |nearest_unigene=Hs.650100 | ||
| − | |num_trans= | + | |num_trans= |
|species=human | |species=human | ||
|start=63859628 | |start=63859628 | ||
| + | |start_of_center_position=63859644 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000376334.3 | + | |transcript_name=ENST00000376334.3 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100795.1 | |tss_id=hg_100795.1 | ||
Latest revision as of 17:51, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 63859644 |
|---|---|
| End of the center position in the TSS region: | 63859645 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000376334.3 |
|---|---|
| Distance: | 0 |
| Num_trans: | |
| All_trans: | HGNC:51768 |
TATA-Box annotation
| Distance to TSS: | -11 |
|---|---|
| Nearest PromoterID: | NR_033907 |
| Entrez ID: | 642236 |
| Nearest Unigene: | Hs.650100 |
| Nearest Refseq: | NR_033907 |
| Nearest Ensembl: | |
| Gene Name: | FSHD region gene 1 family member J, pseudogene |
| Gene Alias: | - |
| Gene Description: | FSHD region gene 1 family member J, pseudogene |
| Gene Type: | pseudo |
| CpG%: | 0.065 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
