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Difference between revisions of "TSS:Hg 1008.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC111058:27 AK300264:-251 ENST00000375408.7:-285 uc010ocs.3:-285 AK092020:-285 NM_001319838:-288 AK129606:483
+
|all_trans=HGNC:25540
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 22: Line 22:
 
|nearest_refseq=NM_018125
 
|nearest_refseq=NM_018125
 
|nearest_unigene=Hs.443460
 
|nearest_unigene=Hs.443460
|num_trans=7
+
|num_trans=55160
 
|species=human
 
|species=human
 
|start=17618600
 
|start=17618600

Latest revision as of 17:51, 19 July 2021

Basic information about the TSS


TSS ID:hg_1008.1
Species:human
Chr:chr1
TSS Classification:yes
Start:17618600
End:17618631
Strand:+
TSS Score:1
Start of the center position in the TSS region:17618615
End of the center position in the TSS region:17618616



Gene and protein annotation


Transcript_name:BC111058
Distance:27
GeneID:55160
HGNC/MGI_ID:HGNC:25540
UniProt_ID:
Gene_name:Rho guanine nucleotide exchange factor 10 like
Gene_symbol:ARHGEF10L
Gene_synonyms:FLJ10521 KIAA1626
Gene_source:HGNC:25540



Transcript annotation


Transcript_name:BC111058
Distance:27
Num_trans:55160
All_trans:HGNC:25540



TATA-Box annotation


Distance to TSS:303
Nearest PromoterID:NM_001319838
Entrez ID:55160
Nearest Unigene:Hs.443460
Nearest Refseq:NM_018125
Nearest Ensembl:ENSG00000074964
Gene Name:Rho guanine nucleotide exchange factor 10 like
Gene Alias:GrinchGEF
Gene Description:Rho guanine nucleotide exchange factor 10 like
Gene Type:protein-coding
CpG%:0.02
GC%:0.621891
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):