Difference between revisions of "TSS:Hg 10088.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 3: | Line 3: | ||
|MIG6= | |MIG6= | ||
|RALT= | |RALT= | ||
| − | |all_trans= | + | |all_trans=HGNC:18185 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| Line 12: | Line 12: | ||
|entrez_id=54206 | |entrez_id=54206 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| − | |gene_alias=GENE-33 | + | |gene_alias=GENE-33{{!}}MIG-6{{!}}MIG6{{!}}RALT |
|gene_description=ERBB receptor feedback inhibitor 1 | |gene_description=ERBB receptor feedback inhibitor 1 | ||
|gene_id=54206 | |gene_id=54206 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_018948 | |nearest_refseq=NM_018948 | ||
|nearest_unigene=Hs.605445 | |nearest_unigene=Hs.605445 | ||
| − | |num_trans= | + | |num_trans=54206 |
|species=human | |species=human | ||
|start=8013551 | |start=8013551 | ||
| Line 31: | Line 31: | ||
|strand=- | |strand=- | ||
|transcript_name=AL137274 | |transcript_name=AL137274 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_10088.1 | |tss_id=hg_10088.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:53, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 8013561 |
|---|---|
| End of the center position in the TSS region: | 8013562 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AL137274 |
|---|---|
| Distance: | -125 |
| Num_trans: | 54206 |
| All_trans: | HGNC:18185 |
TATA-Box annotation
| Distance to TSS: | 12748 |
|---|---|
| Nearest PromoterID: | NM_018948 |
| Entrez ID: | 54206 |
| Nearest Unigene: | Hs.605445 |
| Nearest Refseq: | NM_018948 |
| Nearest Ensembl: | ENSG00000116285 |
| Gene Name: | ERBB receptor feedback inhibitor 1 |
| Gene Alias: | GENE-33|MIG-6|MIG6|RALT |
| Gene Description: | ERBB receptor feedback inhibitor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
