Difference between revisions of "TSS:Hg 100908.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |LTRPC3= | ||
| + | |MLSN2= | ||
| + | |all_trans=NM_001366143:9 NM_001366142:9 NM_001366141:9 NM_001366144:9 ENST00000354500.6:76 AL136545:76 ENST00000357533.6:145 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| − | |distance_to_tss= | + | |distance=9 |
| − | |entrez_id= | + | |distance_to_tss=-13 |
| + | |end=71446989 | ||
| + | |end_of_center_position=71446985 | ||
| + | |entrez_id=80036 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| − | |gene_alias=- | + | |gene_alias=GON-2{{!}}LTRPC3{{!}}MLSN2 |
| − | |gene_description= | + | |gene_description=transient receptor potential cation channel subfamily M member 3 |
| − | |gene_name= | + | |gene_id=80036 |
| + | |gene_name=transient receptor potential cation channel subfamily M member 3 | ||
| + | |gene_source=HGNC:17992 | ||
| + | |gene_symbol=TRPM3 | ||
| + | |gene_synonyms=GON-2 KIAA1616 LTRPC3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |nearest_ensembl= | + | |hgnc_mgi_id=HGNC:17992 |
| − | |nearest_promoter_id= | + | |nearest_ensembl=ENSG00000083067 |
| − | |nearest_refseq= | + | |nearest_promoter_id=NM_001366144 |
| − | |nearest_unigene=Hs. | + | |nearest_refseq=NM_020952 |
| + | |nearest_unigene=Hs.47288 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=71446979 | ||
| + | |start_of_center_position=71446984 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_001366142.2 NM_001366141.2 NM_001366143.2 NM_001366144.2 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100908.1 | |tss_id=hg_100908.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:53, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 71446984 |
|---|---|
| End of the center position in the TSS region: | 71446985 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001366142.2 NM_001366141.2 NM_001366143.2 NM_001366144.2 |
|---|---|
| Distance: | 9 |
| Num_trans: | 7 |
| All_trans: | NM_001366143:9 NM_001366142:9 NM_001366141:9 NM_001366144:9 ENST00000354500.6:76 AL136545:76 ENST00000357533.6:145 |
TATA-Box annotation
| Distance to TSS: | -13 |
|---|---|
| Nearest PromoterID: | NM_001366144 |
| Entrez ID: | 80036 |
| Nearest Unigene: | Hs.47288 |
| Nearest Refseq: | NM_020952 |
| Nearest Ensembl: | ENSG00000083067 |
| Gene Name: | transient receptor potential cation channel subfamily M member 3 |
| Gene Alias: | GON-2|LTRPC3|MLSN2 |
| Gene Description: | transient receptor potential cation channel subfamily M member 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
