Difference between revisions of "TSS:Hg 100948.1"
From referenceTSS
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|ZFAND5A= | |ZFAND5A= | ||
|ZNF216= | |ZNF216= | ||
| − | |all_trans=ENST00000237937.7 | + | |all_trans=NM_001278245:0 NM_001278243:0 ENST00000237937.7:-29 NM_001278244:-29 ENST00000343431.6:-63 ENST00000376956.3:-101 AK025782:-147 ENST00000488164.5:159 BC073131:-185 LF345150:-400 MA580727:-400 AF062346:-408 ENST00000487330.1:-413 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=22 |
|end=72364563 | |end=72364563 | ||
|end_of_center_position=72364534 | |end_of_center_position=72364534 | ||
|entrez_id=7763 | |entrez_id=7763 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=ZA20D2 | + | |gene_alias=ZA20D2{{!}}ZFAND5A{{!}}ZNF216 |
|gene_description=zinc finger AN1-type containing 5 | |gene_description=zinc finger AN1-type containing 5 | ||
|gene_id=7763 | |gene_id=7763 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_006007 | |nearest_refseq=NM_006007 | ||
|nearest_unigene=Hs.406096 | |nearest_unigene=Hs.406096 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=72364504 | |start=72364504 | ||
|start_of_center_position=72364533 | |start_of_center_position=72364533 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NM_001278243.2 NM_001278245.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100948.1 | |tss_id=hg_100948.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=O76080 |
}} | }} | ||
Latest revision as of 17:54, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 72364533 |
|---|---|
| End of the center position in the TSS region: | 72364534 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001278243.2 NM_001278245.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | NM_001278245:0 NM_001278243:0 ENST00000237937.7:-29 NM_001278244:-29 ENST00000343431.6:-63 ENST00000376956.3:-101 AK025782:-147 ENST00000488164.5:159 BC073131:-185 LF345150:-400 MA580727:-400 AF062346:-408 ENST00000487330.1:-413 |
TATA-Box annotation
| Distance to TSS: | 22 |
|---|---|
| Nearest PromoterID: | NM_001278243 |
| Entrez ID: | 7763 |
| Nearest Unigene: | Hs.406096 |
| Nearest Refseq: | NM_006007 |
| Nearest Ensembl: | ENSG00000107372 |
| Gene Name: | zinc finger AN1-type containing 5 |
| Gene Alias: | ZA20D2|ZFAND5A|ZNF216 |
| Gene Description: | zinc finger AN1-type containing 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
