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Difference between revisions of "TSS:Hg 101128.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK290986:12 KJ895699:15 ENST00000376447.3:-227 NM_152573:-227 uc004amo.2:-227 BC023566:-227 ENST00000340717.4:-276 uc004amp.2:-276 AK056176:-276
+
|all_trans=HGNC:26464
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.14
 
|cpg_percent=0.14
 
|distance=12
 
|distance=12
|distance_to_tss=237
+
|distance_to_tss=251
 
|end=83062901
 
|end=83062901
 +
|end_of_center_position=83062892
 
|entrez_id=158158
 
|entrez_id=158158
 
|gc_percent=0.776119
 
|gc_percent=0.776119
Line 21: Line 22:
 
|nearest_refseq=NM_152573
 
|nearest_refseq=NM_152573
 
|nearest_unigene=Hs.129136
 
|nearest_unigene=Hs.129136
|num_trans=9
+
|num_trans=158158
 
|species=human
 
|species=human
 
|start=83062881
 
|start=83062881
 +
|start_of_center_position=83062891
 
|strand=-
 
|strand=-
 
|transcript_name=AK290986
 
|transcript_name=AK290986

Latest revision as of 17:58, 19 July 2021

Basic information about the TSS


TSS ID:hg_101128.1
Species:human
Chr:chr9
TSS Classification:yes
Start:83062881
End:83062901
Strand:-
TSS Score:1
Start of the center position in the TSS region:83062891
End of the center position in the TSS region:83062892



Gene and protein annotation


Transcript_name:AK290986
Distance:12
GeneID:158158
HGNC/MGI_ID:HGNC:26464
UniProt_ID:A8K4M1
Gene_name:RAS and EF-hand domain containing
Gene_symbol:RASEF
Gene_synonyms:FLJ31614
Gene_source:HGNC:26464



Transcript annotation


Transcript_name:AK290986
Distance:12
Num_trans:158158
All_trans:HGNC:26464



TATA-Box annotation


Distance to TSS:251
Nearest PromoterID:NM_152573
Entrez ID:158158
Nearest Unigene:Hs.129136
Nearest Refseq:NM_152573
Nearest Ensembl:ENSG00000165105
Gene Name:RAS and EF-hand domain containing
Gene Alias:RAB45
Gene Description:RAS and EF-hand domain containing
Gene Type:protein-coding
CpG%:0.14
GC%:0.776119
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):