Difference between revisions of "TSS:Hg 101134.1"
From referenceTSS
| Line 31: | Line 31: | ||
|strand=- | |strand=- | ||
|tata_box=29(GTCCTTTAAAAC,-,0.00),31(CCTTTAAAACAG,+,0.00) | |tata_box=29(GTCCTTTAAAAC,-,0.00),31(CCTTTAAAACAG,+,0.00) | ||
| − | |transcript_name=NM_001244962 NM_001375487 | + | |transcript_name=NM_001244962.2 NM_001375487.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_101134.1 | |tss_id=hg_101134.1 | ||
Latest revision as of 17:58, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 83267251 |
|---|---|
| End of the center position in the TSS region: | 83267252 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001244962.2 NM_001375487.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | NM_001244962:0 NM_001375487:0 ENST00000328788.5:-14 BC023560:-14 GQ129452:52 KJ906467:53 |
TATA-Box annotation
| Distance to TSS: | 16 |
|---|---|
| Nearest PromoterID: | NM_001244962 |
| Entrez ID: | 257019 |
| Nearest Unigene: | Hs.127535 |
| Nearest Refseq: | NM_174938 |
| Nearest Ensembl: | ENSG00000172159 |
| Gene Name: | FERM domain containing 3 |
| Gene Alias: | 4.1O|EPB41L4O|EPB41LO|P410 |
| Gene Description: | FERM domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 29(GTCCTTTAAAAC,-,0.00),31(CCTTTAAAACAG,+,0.00) |
