Difference between revisions of "TSS:Hg 101150.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:12508 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=4 |
|end=83707991 | |end=83707991 | ||
|end_of_center_position=83707954 | |end_of_center_position=83707954 | ||
| − | |entrez_id= | + | |entrez_id=29979 |
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=- | + | |gene_alias=DA41{{!}}DSK2{{!}}PLIC-1{{!}}UBQN{{!}}XDRP1 |
| − | |gene_description= | + | |gene_description=ubiquilin 1 |
|gene_id=29979 | |gene_id=29979 | ||
|gene_name=ubiquilin 1 | |gene_name=ubiquilin 1 | ||
| Line 16: | Line 16: | ||
|gene_symbol=UBQLN1 | |gene_symbol=UBQLN1 | ||
|gene_synonyms=DA41 DSK2 PLIC-1 XDRP1 | |gene_synonyms=DA41 DSK2 PLIC-1 XDRP1 | ||
| − | |gene_type= | + | |gene_type=protein-coding |
|hgnc_mgi_id=HGNC:12508 | |hgnc_mgi_id=HGNC:12508 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000135018 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_013438 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_013438 |
|nearest_unigene=Hs.9589 | |nearest_unigene=Hs.9589 | ||
| − | |num_trans= | + | |num_trans=29979 |
|species=human | |species=human | ||
|start=83707916 | |start=83707916 | ||
|start_of_center_position=83707953 | |start_of_center_position=83707953 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000257468.11 | + | |transcript_name=ENST00000376395.9 ENST00000257468.11 BC039294 AK027576 AL136643 BC010066 AK027556 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101150.1 | |tss_id=hg_101150.1 | ||
Latest revision as of 17:58, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 83707953 |
|---|---|
| End of the center position in the TSS region: | 83707954 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000376395.9 ENST00000257468.11 BC039294 AK027576 AL136643 BC010066 AK027556 |
|---|---|
| Distance: | 0 |
| Num_trans: | 29979 |
| All_trans: | HGNC:12508 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_013438 |
| Entrez ID: | 29979 |
| Nearest Unigene: | Hs.9589 |
| Nearest Refseq: | NM_013438 |
| Nearest Ensembl: | ENSG00000135018 |
| Gene Name: | ubiquilin 1 |
| Gene Alias: | DA41|DSK2|PLIC-1|UBQN|XDRP1 |
| Gene Description: | ubiquilin 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
