Difference between revisions of "TSS:Hg 101172.1"
From referenceTSS
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| Line 3: | Line 3: | ||
|HNRPK= | |HNRPK= | ||
|TUNP= | |TUNP= | ||
| − | |all_trans= | + | |all_trans=HGNC:5044 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=3 |
|end=83980226 | |end=83980226 | ||
| + | |end_of_center_position=83980213 | ||
|entrez_id=3190 | |entrez_id=3190 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| − | |gene_alias=AUKS | + | |gene_alias=AUKS{{!}}CSBP{{!}}HNRPK{{!}}TUNP |
|gene_description=heterogeneous nuclear ribonucleoprotein K | |gene_description=heterogeneous nuclear ribonucleoprotein K | ||
|gene_id=3190 | |gene_id=3190 | ||
| Line 21: | Line 22: | ||
|hgnc_mgi_id=HGNC:5044 | |hgnc_mgi_id=HGNC:5044 | ||
|nearest_ensembl=ENSG00000165119 | |nearest_ensembl=ENSG00000165119 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_031263 |
|nearest_refseq=NM_002140 | |nearest_refseq=NM_002140 | ||
|nearest_unigene=Hs.522257 | |nearest_unigene=Hs.522257 | ||
| − | |num_trans= | + | |num_trans=3190 |
|species=human | |species=human | ||
|start=83980198 | |start=83980198 | ||
| + | |start_of_center_position=83980212 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=AB209562 AK096385 AK300744 AK307962 | + | |transcript_name=ENST00000376263.8 AB209562 AK096385 AK300744 AK307962 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101172.1 | |tss_id=hg_101172.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B4DUQ1 | + | |uniprot_id=B4DUQ1 P61978 |
}} | }} | ||
Latest revision as of 17:59, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 83980212 |
|---|---|
| End of the center position in the TSS region: | 83980213 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000376263.8 AB209562 AK096385 AK300744 AK307962 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3190 |
| All_trans: | HGNC:5044 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NM_031263 |
| Entrez ID: | 3190 |
| Nearest Unigene: | Hs.522257 |
| Nearest Refseq: | NM_002140 |
| Nearest Ensembl: | ENSG00000165119 |
| Gene Name: | heterogeneous nuclear ribonucleoprotein K |
| Gene Alias: | AUKS|CSBP|HNRPK|TUNP |
| Gene Description: | heterogeneous nuclear ribonucleoprotein K |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
