Difference between revisions of "TSS:Hg 101190.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|NNA1= | |NNA1= | ||
| − | |all_trans= | + | |all_trans=HGNC:17258 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| Line 7: | Line 7: | ||
|distance_to_tss=181 | |distance_to_tss=181 | ||
|end=85741850 | |end=85741850 | ||
| + | |end_of_center_position=85741848 | ||
|entrez_id=23287 | |entrez_id=23287 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias=CCP1 | + | |gene_alias=CCP1{{!}}CONDCA{{!}}NNA1 |
|gene_description=ATP/GTP binding protein 1 | |gene_description=ATP/GTP binding protein 1 | ||
|gene_id=23287 | |gene_id=23287 | ||
| − | |gene_name=ATP/GTP binding | + | |gene_name=ATP/GTP binding carboxypeptidase 1 |
|gene_source=HGNC:17258 | |gene_source=HGNC:17258 | ||
|gene_symbol=AGTPBP1 | |gene_symbol=AGTPBP1 | ||
| Line 19: | Line 20: | ||
|hgnc_mgi_id=HGNC:17258 | |hgnc_mgi_id=HGNC:17258 | ||
|nearest_ensembl=ENSG00000135049 | |nearest_ensembl=ENSG00000135049 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001286717 |
|nearest_refseq=NM_015239 | |nearest_refseq=NM_015239 | ||
|nearest_unigene=Hs.719980 | |nearest_unigene=Hs.719980 | ||
| − | |num_trans= | + | |num_trans=23287 |
|species=human | |species=human | ||
|start=85741845 | |start=85741845 | ||
| + | |start_of_center_position=85741847 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000376083.7 | + | |transcript_name=ENST00000376083.7 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101190.1 | |tss_id=hg_101190.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A0A024R288 | + | |uniprot_id=A0A024R288 |
}} | }} | ||
Latest revision as of 17:59, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 85741847 |
|---|---|
| End of the center position in the TSS region: | 85741848 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000376083.7 |
|---|---|
| Distance: | 28 |
| Num_trans: | 23287 |
| All_trans: | HGNC:17258 |
TATA-Box annotation
| Distance to TSS: | 181 |
|---|---|
| Nearest PromoterID: | NM_001286717 |
| Entrez ID: | 23287 |
| Nearest Unigene: | Hs.719980 |
| Nearest Refseq: | NM_015239 |
| Nearest Ensembl: | ENSG00000135049 |
| Gene Name: | ATP/GTP binding carboxypeptidase 1 |
| Gene Alias: | CCP1|CONDCA|NNA1 |
| Gene Description: | ATP/GTP binding protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
