Difference between revisions of "TSS:Hg 101228.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:4165 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| − | |distance_to_tss=- | + | |distance=20 |
| + | |distance_to_tss=-30 | ||
| + | |end=86947547 | ||
| + | |end_of_center_position=86947537 | ||
|entrez_id=2619 | |entrez_id=2619 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=growth arrest specific 1 | |gene_description=growth arrest specific 1 | ||
| − | |gene_name=GAS1 | + | |gene_id=2619 |
| + | |gene_name=growth arrest specific 1 | ||
| + | |gene_source=HGNC:4165 | ||
| + | |gene_symbol=GAS1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:4165 | ||
|nearest_ensembl=ENSG00000180447 | |nearest_ensembl=ENSG00000180447 | ||
|nearest_promoter_id=NM_002048 | |nearest_promoter_id=NM_002048 | ||
|nearest_refseq=NM_002048 | |nearest_refseq=NM_002048 | ||
|nearest_unigene=Hs.65029 | |nearest_unigene=Hs.65029 | ||
| − | |tata_box= | + | |num_trans=2619 |
| + | |species=human | ||
| + | |start=86947525 | ||
| + | |start_of_center_position=86947536 | ||
| + | |strand=- | ||
| + | |tata_box=-1(GTATTTAAAGCC,+,0.00) | ||
| + | |transcript_name=ENST00000298743.9 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101228.1 | |tss_id=hg_101228.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=P54826 | ||
}} | }} | ||
Latest revision as of 18:00, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 86947536 |
|---|---|
| End of the center position in the TSS region: | 86947537 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000298743.9 |
|---|---|
| Distance: | 20 |
| Num_trans: | 2619 |
| All_trans: | HGNC:4165 |
TATA-Box annotation
| Distance to TSS: | -30 |
|---|---|
| Nearest PromoterID: | NM_002048 |
| Entrez ID: | 2619 |
| Nearest Unigene: | Hs.65029 |
| Nearest Refseq: | NM_002048 |
| Nearest Ensembl: | ENSG00000180447 |
| Gene Name: | growth arrest specific 1 |
| Gene Alias: | - |
| Gene Description: | growth arrest specific 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -1(GTATTTAAAGCC,+,0.00) |
