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Difference between revisions of "TSS:Hg 10126.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000488215.5:-322
+
|all_trans=HGNC:9965
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 22: Line 22:
 
|nearest_refseq=NR_125999
 
|nearest_refseq=NR_125999
 
|nearest_unigene=Hs.568612
 
|nearest_unigene=Hs.568612
|num_trans=1
+
|num_trans=473
 
|species=human
 
|species=human
 
|start=8424866
 
|start=8424866

Latest revision as of 18:01, 19 July 2021

Basic information about the TSS


TSS ID:hg_10126.1
Species:human
Chr:chr1
TSS Classification:no
Start:8424866
End:8424890
Strand:-
TSS Score:1
Start of the center position in the TSS region:8424878
End of the center position in the TSS region:8424879



Gene and protein annotation


Transcript_name:ENST00000488215.5
Distance:-322
GeneID:473
HGNC/MGI_ID:HGNC:9965
UniProt_ID:K7EIQ4
Gene_name:arginine-glutamic acid dipeptide repeats
Gene_symbol:RERE
Gene_synonyms:ARG ARP ATN2 DNB1 KIAA0458
Gene_source:HGNC:9965



Transcript annotation


Transcript_name:ENST00000488215.5
Distance:-322
Num_trans:473
All_trans:HGNC:9965



TATA-Box annotation


Distance to TSS:233
Nearest PromoterID:NR_125999
Entrez ID:102724552
Nearest Unigene:Hs.568612
Nearest Refseq:NR_125999
Nearest Ensembl:
Gene Name:arginine-glutamic acid dipeptide repeats
Gene Alias:-
Gene Description:RERE antisense RNA 1
Gene Type:ncRNA
CpG%:0.01
GC%:0.547264
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):