Difference between revisions of "TSS:Hg 101260.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=12342 |entrez_id=102724156 |gc_percent=0.542289 |gene_alias=- |gene_description=uncharacterized LOC102724156 |gene_name=LOC1027...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:39052 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=0 | ||
|distance_to_tss=12342 | |distance_to_tss=12342 | ||
| + | |end=88065565 | ||
| + | |end_of_center_position=88065558 | ||
|entrez_id=102724156 | |entrez_id=102724156 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC102724156 | |gene_description=uncharacterized LOC102724156 | ||
| − | |gene_name= | + | |gene_id=100131068 |
| + | |gene_name=endogenous retrovirus group I member 1 | ||
| + | |gene_source=HGNC:39052 | ||
| + | |gene_symbol=ERVI-1 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:39052 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_135137 | |nearest_promoter_id=NR_135137 | ||
|nearest_refseq=NR_135137 | |nearest_refseq=NR_135137 | ||
|nearest_unigene=Hs.633031 | |nearest_unigene=Hs.633031 | ||
| + | |num_trans=100131068 | ||
| + | |species=human | ||
| + | |start=88065550 | ||
| + | |start_of_center_position=88065557 | ||
| + | |strand=- | ||
| + | |transcript_name=AK124340 | ||
| + | |tss_classification=no | ||
|tss_id=hg_101260.1 | |tss_id=hg_101260.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:01, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 88065557 |
|---|---|
| End of the center position in the TSS region: | 88065558 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK124340 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100131068 |
| All_trans: | HGNC:39052 |
TATA-Box annotation
| Distance to TSS: | 12342 |
|---|---|
| Nearest PromoterID: | NR_135137 |
| Entrez ID: | 102724156 |
| Nearest Unigene: | Hs.633031 |
| Nearest Refseq: | NR_135137 |
| Nearest Ensembl: | |
| Gene Name: | endogenous retrovirus group I member 1 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC102724156 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
