Difference between revisions of "TSS:Hg 101278.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-5 |entrez_id=53358 |gc_percent=0.487562 |gene_alias=N-Shc|NSHC|RAI|SHCC |gene_description=SHC adaptor protein 3 |gene_name=SHC...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |NSHC= | ||
| + | |RAI= | ||
| + | |SHCC= | ||
| + | |all_trans=HGNC:18181 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=46 | ||
| + | |end=89178783 | ||
| + | |end_of_center_position=89178772 | ||
|entrez_id=53358 | |entrez_id=53358 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| − | |gene_alias=N-Shc | + | |gene_alias=N-Shc{{!}}NSHC{{!}}RAI{{!}}SHCC |
|gene_description=SHC adaptor protein 3 | |gene_description=SHC adaptor protein 3 | ||
| − | |gene_name=SHC3 | + | |gene_id=53358 |
| + | |gene_name=SHC adaptor protein 3 | ||
| + | |gene_source=HGNC:18181 | ||
| + | |gene_symbol=SHC3 | ||
| + | |gene_synonyms=N-Shc NSHC SHCC | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:18181 | ||
|nearest_ensembl=ENSG00000148082 | |nearest_ensembl=ENSG00000148082 | ||
|nearest_promoter_id=NM_016848 | |nearest_promoter_id=NM_016848 | ||
|nearest_refseq=NM_016848 | |nearest_refseq=NM_016848 | ||
|nearest_unigene=Hs.292737 | |nearest_unigene=Hs.292737 | ||
| + | |num_trans=53358 | ||
| + | |species=human | ||
| + | |start=89178760 | ||
| + | |start_of_center_position=89178771 | ||
| + | |strand=- | ||
| + | |transcript_name=BC026314 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101278.1 | |tss_id=hg_101278.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:01, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 89178771 |
|---|---|
| End of the center position in the TSS region: | 89178772 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC026314 |
|---|---|
| Distance: | 0 |
| Num_trans: | 53358 |
| All_trans: | HGNC:18181 |
TATA-Box annotation
| Distance to TSS: | 46 |
|---|---|
| Nearest PromoterID: | NM_016848 |
| Entrez ID: | 53358 |
| Nearest Unigene: | Hs.292737 |
| Nearest Refseq: | NM_016848 |
| Nearest Ensembl: | ENSG00000148082 |
| Gene Name: | SHC adaptor protein 3 |
| Gene Alias: | N-Shc|NSHC|RAI|SHCC |
| Gene Description: | SHC adaptor protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
