Difference between revisions of "TSS:Hg 10132.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:9965 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-31029 | |distance_to_tss=-31029 | ||
|end=8525997 | |end=8525997 | ||
| + | |end_of_center_position=8525942 | ||
|entrez_id=106632271 | |entrez_id=106632271 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
|gene_alias=ZL43 | |gene_alias=ZL43 | ||
| − | |gene_description= | + | |gene_description=small nucleolar RNA, C/D box 128 |
|gene_id=473 | |gene_id=473 | ||
| − | |gene_name=arginine-glutamic acid dipeptide | + | |gene_name=arginine-glutamic acid dipeptide repeats |
|gene_source=HGNC:9965 | |gene_source=HGNC:9965 | ||
|gene_symbol=RERE | |gene_symbol=RERE | ||
| − | |gene_synonyms=ARG ARP DNB1 KIAA0458 | + | |gene_synonyms=ARG ARP ATN2 DNB1 KIAA0458 |
|gene_type=snoRNA | |gene_type=snoRNA | ||
|hgnc_mgi_id=HGNC:9965 | |hgnc_mgi_id=HGNC:9965 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_132752 | |nearest_refseq=NR_132752 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=473 |
|species=human | |species=human | ||
|start=8525886 | |start=8525886 | ||
| + | |start_of_center_position=8525941 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=81(GTGTAGAAAAGG,-,0.00) |
| − | |transcript_name=ENST00000377464.5 | + | |transcript_name=ENST00000377464.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10132.1 | |tss_id=hg_10132.1 | ||
Latest revision as of 18:02, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 8525941 |
|---|---|
| End of the center position in the TSS region: | 8525942 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000377464.5 |
|---|---|
| Distance: | 0 |
| Num_trans: | 473 |
| All_trans: | HGNC:9965 |
TATA-Box annotation
| Distance to TSS: | -31029 |
|---|---|
| Nearest PromoterID: | NR_132752 |
| Entrez ID: | 106632271 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_132752 |
| Nearest Ensembl: | |
| Gene Name: | arginine-glutamic acid dipeptide repeats |
| Gene Alias: | ZL43 |
| Gene Description: | small nucleolar RNA, C/D box 128 |
| Gene Type: | snoRNA |
| CpG%: | 0.02 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 81(GTGTAGAAAAGG,-,0.00) |
