Difference between revisions of "TSS:Hg 101340.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:27988 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=-305 |
|distance_to_tss=73803 | |distance_to_tss=73803 | ||
|end=90508955 | |end=90508955 | ||
| Line 10: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=long intergenic non-protein coding RNA 1501 | |gene_description=long intergenic non-protein coding RNA 1501 | ||
| − | |gene_name=LINC01501 | + | |gene_id= |
| + | |gene_name=long intergenic non-protein coding RNA 1501 | ||
| + | |gene_source=HGNC:27988 | ||
| + | |gene_symbol=LINC01501 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:27988 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_034157 | |nearest_promoter_id=NR_034157 | ||
|nearest_refseq=NM_001105317 | |nearest_refseq=NM_001105317 | ||
|nearest_unigene=Hs.522284 | |nearest_unigene=Hs.522284 | ||
| − | |num_trans= | + | |num_trans= |
|species=human | |species=human | ||
|start=90508930 | |start=90508930 | ||
|start_of_center_position=90508942 | |start_of_center_position=90508942 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000667748.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_101340.1 | |tss_id=hg_101340.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:02, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 90508942 |
|---|---|
| End of the center position in the TSS region: | 90508943 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000667748.1 |
|---|---|
| Distance: | -305 |
| Num_trans: | |
| All_trans: | HGNC:27988 |
TATA-Box annotation
| Distance to TSS: | 73803 |
|---|---|
| Nearest PromoterID: | NR_034157 |
| Entrez ID: | 340515 |
| Nearest Unigene: | Hs.522284 |
| Nearest Refseq: | NM_001105317 |
| Nearest Ensembl: | |
| Gene Name: | long intergenic non-protein coding RNA 1501 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 1501 |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
