Difference between revisions of "TSS:Hg 101396.1"
From referenceTSS
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|BDB1= | |BDB1= | ||
|NTRKR2= | |NTRKR2= | ||
| − | |all_trans= | + | |all_trans=HGNC:10257 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
|distance=-30 | |distance=-30 | ||
| − | |distance_to_tss= | + | |distance_to_tss=101 |
|end=91950132 | |end=91950132 | ||
|end_of_center_position=91950127 | |end_of_center_position=91950127 | ||
|entrez_id=4920 | |entrez_id=4920 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
| − | |gene_alias=BDB | + | |gene_alias=BDB{{!}}BDB1{{!}}NTRKR2 |
|gene_description=receptor tyrosine kinase like orphan receptor 2 | |gene_description=receptor tyrosine kinase like orphan receptor 2 | ||
|gene_id=4920 | |gene_id=4920 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:10257 | |hgnc_mgi_id=HGNC:10257 | ||
|nearest_ensembl=ENSG00000169071 | |nearest_ensembl=ENSG00000169071 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001318204 |
|nearest_refseq=NM_004560 | |nearest_refseq=NM_004560 | ||
|nearest_unigene=Hs.98255 | |nearest_unigene=Hs.98255 | ||
| − | |num_trans= | + | |num_trans=4920 |
|species=human | |species=human | ||
|start=91950121 | |start=91950121 | ||
|start_of_center_position=91950126 | |start_of_center_position=91950126 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=M97639 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101396.1 | |tss_id=hg_101396.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 18:04, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 91950126 |
|---|---|
| End of the center position in the TSS region: | 91950127 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | M97639 |
|---|---|
| Distance: | -30 |
| Num_trans: | 4920 |
| All_trans: | HGNC:10257 |
TATA-Box annotation
| Distance to TSS: | 101 |
|---|---|
| Nearest PromoterID: | NM_001318204 |
| Entrez ID: | 4920 |
| Nearest Unigene: | Hs.98255 |
| Nearest Refseq: | NM_004560 |
| Nearest Ensembl: | ENSG00000169071 |
| Gene Name: | receptor tyrosine kinase like orphan receptor 2 |
| Gene Alias: | BDB|BDB1|NTRKR2 |
| Gene Description: | receptor tyrosine kinase like orphan receptor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
