Difference between revisions of "TSS:Hg 101399.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.155 |distance_to_tss=-50 |entrez_id=4920 |gc_percent=0.81592 |gene_alias=BDB|BDB1|NTRKR2 |gene_description=receptor tyrosine kinase like orphan rece...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |BDB1= | ||
| + | |NTRKR2= | ||
| + | |all_trans=HGNC:10257 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=16 | ||
| + | |end=91950233 | ||
| + | |end_of_center_position=91950213 | ||
|entrez_id=4920 | |entrez_id=4920 | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
| − | |gene_alias=BDB | + | |gene_alias=BDB{{!}}BDB1{{!}}NTRKR2 |
|gene_description=receptor tyrosine kinase like orphan receptor 2 | |gene_description=receptor tyrosine kinase like orphan receptor 2 | ||
| − | |gene_name=ROR2 | + | |gene_id=4920 |
| + | |gene_name=receptor tyrosine kinase like orphan receptor 2 | ||
| + | |gene_source=HGNC:10257 | ||
| + | |gene_symbol=ROR2 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10257 | ||
|nearest_ensembl=ENSG00000169071 | |nearest_ensembl=ENSG00000169071 | ||
|nearest_promoter_id=NM_001318204 | |nearest_promoter_id=NM_001318204 | ||
|nearest_refseq=NM_004560 | |nearest_refseq=NM_004560 | ||
|nearest_unigene=Hs.98255 | |nearest_unigene=Hs.98255 | ||
| + | |num_trans=4920 | ||
| + | |species=human | ||
| + | |start=91950191 | ||
| + | |start_of_center_position=91950212 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000375708.4 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101399.1 | |tss_id=hg_101399.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q01974 | ||
}} | }} | ||
Latest revision as of 18:04, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 91950212 |
|---|---|
| End of the center position in the TSS region: | 91950213 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000375708.4 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4920 |
| All_trans: | HGNC:10257 |
TATA-Box annotation
| Distance to TSS: | 16 |
|---|---|
| Nearest PromoterID: | NM_001318204 |
| Entrez ID: | 4920 |
| Nearest Unigene: | Hs.98255 |
| Nearest Refseq: | NM_004560 |
| Nearest Ensembl: | ENSG00000169071 |
| Gene Name: | receptor tyrosine kinase like orphan receptor 2 |
| Gene Alias: | BDB|BDB1|NTRKR2 |
| Gene Description: | receptor tyrosine kinase like orphan receptor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
