Difference between revisions of "TSS:Hg 101404.1"
From referenceTSS
| Line 5: | Line 5: | ||
|SPT1= | |SPT1= | ||
|SPTI= | |SPTI= | ||
| − | |all_trans= | + | |all_trans=HGNC:11277 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_006415 | |nearest_refseq=NM_006415 | ||
|nearest_unigene=Hs.90458 | |nearest_unigene=Hs.90458 | ||
| − | |num_trans= | + | |num_trans=10558 |
|species=human | |species=human | ||
|start=92115385 | |start=92115385 | ||
|start_of_center_position=92115404 | |start_of_center_position=92115404 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000262554.7 | + | |transcript_name=ENST00000262554.7 AK098344 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101404.1 | |tss_id=hg_101404.1 | ||
Latest revision as of 18:04, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 92115404 |
|---|---|
| End of the center position in the TSS region: | 92115405 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000262554.7 AK098344 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10558 |
| All_trans: | HGNC:11277 |
TATA-Box annotation
| Distance to TSS: | 8 |
|---|---|
| Nearest PromoterID: | NM_001368273 |
| Entrez ID: | 10558 |
| Nearest Unigene: | Hs.90458 |
| Nearest Refseq: | NM_006415 |
| Nearest Ensembl: | ENSG00000090054 |
| Gene Name: | serine palmitoyltransferase long chain base subunit 1 |
| Gene Alias: | HSAN1|HSN1|LBC1|LCB1|SPT1|SPTI |
| Gene Description: | serine palmitoyltransferase long chain base subunit 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
